Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00606 ATGTTTATGTGTAACTTCCCAATCTACAGAAATCTCGATTCTCTGAAACACAAGATATTTCCCATATTCCAATTAAAGAAAGGACCAAACTTGAGAAATCTCTTGAGTTCCCAACCACCAAAAATGTCATCCATGGCTTTCTCCACCACCTTCTTCACACCCATCCATGATTTCAACCATGCCAGAACACCCTCTTTTCCTTTCATCAAATCCTCCTTTGCTTCCTCCAACTCAACCTTTTTTCATCCTTCCCTTTCCCTACAAACCTCATCAACTTTTCCCAGGCTCTTCATAAAGCCTAGGTCTTTCTCAGTTCATGCAAGAGCTGCCACAGAAAAGACCATTTATGATTTTACTGTCAAGGATATTGACAGAAAGGATGTCCCTCTCAACAAATTTAAGGGGAAGGTTCTATTGATTGTCAATGTTGCTTCACGATGTGGTTTGACGTCATCGAATTACTCGGAGCTGTCTCGTTTGTATGAAAAGTATAAGGATCAAGGTTTGGAGGTTCTGGCTTTCCCCTGCAATCAATTTGGTATGCAGGAACCTGGATCGAATGAAGAAATTAAGCAGTTTGCTTGCACTCGATACAAAGCAGAATTTCCGATTTTTGACAAGGTGGATGTCAATGGACCATTTACGGCTCCAGTGTATCAGTTTCTGAAATCTAGTGCTGGAGGCTTTCTGGGGGATCTTATAAAGTGGAATTTTGAGAAATTCTTGGTTGATAAAAATGGTAAAGTTATTGAAAGATACCCACCAACAACGTCACCTTTCCAAATTGAGAAGGATATTCAGAGGTTACTTGCTGCATGA 819 0.4029 MFMCNFPIYRNLDSLKHKIFPIFQLKKGPNLRNLLSSQPPKMSSMAFSTTFFTPIHDFNHARTPSFPFIKSSFASSNSTFFHPSLSLQTSSTFPRLFIKPRSFSVHARAATEKTIYDFTVKDIDRKDVPLNKFKGKVLLIVNVASRCGLTSSNYSELSRLYEKYKDQGLEVLAFPCNQFGMQEPGSNEEIKQFACTRYKAEFPIFDKVDVNGPFTAPVYQFLKSSAGGFLGDLIKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQRLLAA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00606 272 PANTHER GLUTATHIONE PEROXIDASE 107 270 IPR000889 GO:0004602|GO:0006979
Viun8g00606 272 ProSitePatterns Glutathione peroxidases signature 2. 172 179 IPR029760 -
Viun8g00606 272 ProSitePatterns Glutathione peroxidases active site. 135 150 IPR029759 -
Viun8g00606 272 CDD GSH_Peroxidase 114 266 IPR000889 GO:0004602|GO:0006979
Viun8g00606 272 FunFam Glutathione peroxidase 106 272 - -
Viun8g00606 272 Pfam Glutathione peroxidase 115 223 IPR000889 GO:0004602|GO:0006979
Viun8g00606 272 ProSiteProfiles Thioredoxin domain profile. 109 271 IPR013766 -
Viun8g00606 272 SUPERFAMILY Thioredoxin-like 114 271 IPR036249 -
Viun8g00606 272 PRINTS Glutathione peroxidase family signature 133 150 IPR000889 GO:0004602|GO:0006979
Viun8g00606 272 PRINTS Glutathione peroxidase family signature 169 185 IPR000889 GO:0004602|GO:0006979
Viun8g00606 272 PRINTS Glutathione peroxidase family signature 234 243 IPR000889 GO:0004602|GO:0006979
Viun8g00606 272 Gene3D Glutaredoxin 101 272 - -
Viun8g00606 272 ProSiteProfiles Glutathione peroxidase profile. 105 272 IPR000889 GO:0004602|GO:0006979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00606 Viun-Chr8 4616458 4619847 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00606 K00432 - gmx:100305775 425.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00606 8 4616458 4619847 Viun8g00606 8 4616458 4619847 ECH