Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00586 ATGGATTTCAGAGTGATGGGTTTGGAATCTCCACTGTTCCACACGCTGCACCGCATGATGGACATGTCGGAGGAGGGTGCAGGGGAGAAGACACACAATGCTCCGACACAGACATACATGCGAGACGCGAAAGCAATGGCTGCAACACCTGCGGATGTGAAGGAATATCCCAATTCCTACGTGTTCGTGGTCGACATGCCGGGGTTGAAATCTGGTGACATAAAGGTTCAGGTTGAAGATGATAACGTGCTTTTGATTAGCGGGGAGAGAAAGAGGGAAGAAGAGAAAGAAGAGAAAGAAGGGGTGAAGTTTCTGAGAATGGAACGGAGGGTTGGGAAATTCATGCGCAAGTTTGTTTTACCTGAAAATGCGAACACTGATGCGATCTCTGCTGTGTGTCAAGATGGTGTGCTTAGTGTTACTGTGCAGAAATTGCCTCCTCCTCAACCTAAGAAGCCTAGGACCATTGAAGTCAAGATTGCTTGA 486 0.4794 MDFRVMGLESPLFHTLHRMMDMSEEGAGEKTHNAPTQTYMRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLLISGERKREEEKEEKEGVKFLRMERRVGKFMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPQPKKPRTIEVKIA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00586 161 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 12 159 IPR031107 -
Viun8g00586 161 Gene3D - 5 160 IPR008978 -
Viun8g00586 161 FunFam 17.3 kDa class II heat shock protein-like 11 160 - -
Viun8g00586 161 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 42 159 IPR002068 -
Viun8g00586 161 Pfam Hsp20/alpha crystallin family 52 159 IPR002068 -
Viun8g00586 161 SUPERFAMILY HSP20-like chaperones 33 153 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00586 Viun-Chr8 4364904 4365737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00586 K13993 - gmx:100500666 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00586 8 4364904 4365737 Viun8g00586 8 4364904 4365737 ECH