Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00580 ATGGCTTCTCTCTCCGTTTCAATGGTTCTGCCACTCAGCTCCGCCACCAAGAACAGGTCAAAGTCAAACCCTCCTCCCTCCGAAGCCTTCTTGAAGAGGAGTGCGGCGAAGAAATGGTCAGAGGCAGAACCGAAAAAGCTCACCATGGAAGCGTCTTTGAAGGAAAAAGCAGTGAAGGGACTGAGTGCTGCTGCAGTAACATCGGGCATGGTGATTCCTGAAGTGGCTCATGCAGCGGGATATGACTTCTCTCCTTCGCTGCAAAACTTTCTGCTAAGTATTGCTGCCGGTGGGGTTGTGCTCGTTGCGATATTTGGTGCTGTTATCGGAGTCGCAAACTTTGATCCGGTGAAGAGAACTTGA 363 0.5096 MASLSVSMVLPLSSATKNRSKSNPPPSEAFLKRSAAKKWSEAEPKKLTMEASLKEKAVKGLSAAAVTSGMVIPEVAHAAGYDFSPSLQNFLLSIAAGGVVLVAIFGAVIGVANFDPVKRT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00580 120 MobiDBLite consensus disorder prediction 14 36 - -
Viun8g00580 120 PANTHER OS07G0673550 PROTEIN 1 120 - -
Viun8g00580 120 Gene3D Single helix bin 83 120 - -
Viun8g00580 120 Pfam Photosystem II reaction centre X protein (PsbX) 84 119 IPR009518 GO:0009523|GO:0015979|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00580 Viun-Chr8 4224127 4224778 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00580 - - lang:109358190 132.494