Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00539 ATGTGGGAATCTATTCTATTGACGGTGGCTGCCACCGCCGGCAACAACATTGGAAAGATCCTTCAGAAGAAGGGCACTATCATTCTTCCTCCTCTTTCTTTCAAACTCAAGGTCATAAGGTCTTATGCTTCAAACAGAACCTGGGTGATAGGTTTTCTAGTGGATATATTTGGGGCATTATTGATGTTAAGGGCATTGTCTTTGGCTCCAGTCTCTGTAATCCAACCAGTTTCTGGCTGTGGACTAGCAATTCTATCAATTTTTTCCCATTTTTATCTCAAGGAAGTTATGAATGCTGTTGATTGGGTTGGCATTACATTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGTGAGAAGCATGAGATACTGCTTAATGGATGGGTTCGAATATGCAAGAGTCAACGAAGAGAACAAGAAATGATGGAATATGATGTCGTTGAGGAAATCATCTATGGCTTGGAATCTGGTATTTTGTTTGGGATGTCATCTGTAATATCAAAGATGGGATTTCTATTCCTTGATCAAGGTTTTCCCAAGCTGTTGGCTCCTTTGTGCATCCTGATCAGTGTCTGTTGTAGTGGCACAGGCTTTTACTATCAGACACGAGGTCTAAAGCATGGGAGGGCTATTGTAGTTTCTACATGTGCAGCTGTGGCATCAATTTTGACTGGTGTACTTGCTGGGATGTTTGCTTTGGGTGAGCGACTTCCTTCAGAACCGAAAGCTCGCCTCGCACTTCTTCTTGGATGGCTACTTATTATTGTGGGTGTGATTTTACTTGTTGGTTCAACACGGCTAGTGAGATTTCTTTCATGTTCTTCGAGACAAAGAAGAAGCAATGTGGATAAGAATTTTGGCCTTAGAAGAACCACTTCTTCCCGGGTTAGGGAACCAAGTCCAAGTGCTATCATTCAAGCAGCAACATTAAATCATTTACTATCATCATCTTCCAAAGAAAAAGCTTGA 972 0.4208 MWESILLTVAATAGNNIGKILQKKGTIILPPLSFKLKVIRSYASNRTWVIGFLVDIFGALLMLRALSLAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWVGITLAGFGTIGVGAGGEKHEILLNGWVRICKSQRREQEMMEYDVVEEIIYGLESGILFGMSSVISKMGFLFLDQGFPKLLAPLCILISVCCSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMFALGERLPSEPKARLALLLGWLLIIVGVILLVGSTRLVRFLSCSSRQRRSNVDKNFGLRRTTSSRVREPSPSAIIQAATLNHLLSSSSKEKA 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00539 323 PANTHER UNCHARACTERIZED 2 122 IPR008521 GO:0015095|GO:0015693|GO:0016020
Viun8g00539 323 Gene3D - 4 118 - -
Viun8g00539 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 25 119 - -
Viun8g00539 323 FunFam Probable magnesium transporter 5 119 - -
Viun8g00539 323 SUPERFAMILY Multidrug resistance efflux transporter EmrE 172 265 - -
Viun8g00539 323 Pfam Magnesium transporter NIPA 19 113 IPR008521 GO:0015095|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00539 Viun-Chr8 3896281 3901226 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00539 - - gmx:100819228 556.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00539 8 3896281 3901226 Viun9g03284 9 39680630 39684412 PCT