Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00531 ATGCAAGGCCTCCGCCGCTGCTCAAACGACGTCGTACGCCTCGACCTCACCACTCCCACGCCGGCCACAATCAACTCCTCCACCACCTCATCGTCCTCCTCCTCGCTCTCCATCGACGTCGAGGAACCCACGGAGGCGCGTATCCAGCGGCTCATATCGGAGCATCCGGTGATCATCTTCACGCGCTCCTCCTGCTGCATGTGCCACGTCATGAAGAAGCTCCTCGCCACCATCGGAGTCAACCCCACCGTCATCGAATTGGACGACCACGAGATAACGGCCCTCCCGGACGCCACCCGCACTCCCGCCGTCTTCATCGGCGGCGCCTCCGTCGGCGGCCTCGAGTCCCTCGTCGCCCTCCACGTCAGCGGCCACCTCGTCCCCAAACTCGTCCAAGTCGGCGCCCTCTGGACACATGCTGGTTCAGTTTGA 432 0.6412 MQGLRRCSNDVVRLDLTTPTPATINSSTTSSSSSSLSIDVEEPTEARIQRLISEHPVIIFTRSSCCMCHVMKKLLATIGVNPTVIELDDHEITALPDATRTPAVFIGGASVGGLESLVALHVSGHLVPKLVQVGALWTHAGSV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00531 143 NCBIfam glutaredoxin-like family 48 137 IPR011905 -
Viun8g00531 143 SUPERFAMILY Thioredoxin-like 45 137 IPR036249 -
Viun8g00531 143 CDD GRX_GRXh_1_2_like 56 129 - -
Viun8g00531 143 Pfam Glutaredoxin 57 109 IPR002109 -
Viun8g00531 143 ProSiteProfiles Glutaredoxin domain profile. 45 137 - -
Viun8g00531 143 MobiDBLite consensus disorder prediction 18 38 - -
Viun8g00531 143 Gene3D Glutaredoxin 38 140 - -
Viun8g00531 143 PANTHER GLUTAREDOXIN 47 137 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00531 Viun-Chr8 3833577 3834799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00531 47 137 Miscellaneous Gene Families AT4G15700 43.434 6.31e-25 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00531 - - vum:124825497 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00531 8 3833577 3834799 Viun9g03292 9 39749185 39750030 PCT