Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00529 ATGAAGATCATTGCAGAGCTACTGTTATTTGTTGCAGTTCCTTTTCTGCTCAACAATGGAAATGGAATTCAAGCATTCTCCACACATAGCATCAATTCCAGAGCAACTGCAAAGCAACCTTATCGAACTTCTTATCACTTTCAACCCCAAGAGAATTGGATGAATGATCCCAATGGGCCTATGTACTACAAAGGTGTTTACCACCTTTTCTATCAGCATAACCCTGAAGCAGCAACCTTTGGTGATAGGATTGTGTGGGGTCACTCAGTATCCTATGATCTCATCAATTGGATTCATCTGAATAATGCTATTGAACCAAGTGGAGCATATGATATTAACAGCTGTTGGTCAGGCTCAGCCACTATAATCCCTGGGAAAGAAGAGCCTATGATTTTGTACACAGGAATTGATGATAAGAAACATCAAGTTCAGAACCTAGCTGTGCCAAAGAATCTATCAGACATCTTCTTAAGGGAATGGGTGAAACACTCTGAGAACCCTGTGATGACTCCACCAAGTGGAGTTGAAGTTGATAATTTCAGAGACCCTTCAACTGCTTGGCAGGGAAAGGATGGGAAATGGAGGGTAGTGGTTGGTGCCCAAAATGGTGATGAAGGGAAGGCAATTCTCTACCAAAGTGAGGATTTTGTGAATTGGAAAGTGGATCCTAATCCCTTTTATGCATCACAAAATACTGGGGTTTGTGAGTGTCCAGACTTTTTTCCTGTGTACATGAATGGCAGCACAAATGGGGTGGATACATCTGTGCAAAATCCAAGTGTCAGACATGTCTTGAAGATAAGCTACCTAAGCAAGCTGCATGATTACTATTTTCTTGGTAAATATGCATCTGATCAGGGAAACTTCATTCCTGATGTAAGGTTTACAGGGACTAGTTCAGACTTGAGGTATGACTATGGTAAATTCTATGCTTCCAAGTCATTTTTTGACCATGCCAAGAACAGGAGAATATTGTGGGGATGGGTGAACGAATCTGACTCCACACAAGATGACATTCAGAAAGGATGGGCTGGTCTACAGACAATTCCAAGGCAAGTTTGGCTTGATAAGAGTGGGAAGCGATTGGTTCAGTGGCCACTTGAAGAGCTAGAACAACTACGTGGCAAGCACATAAGAATAACGGGGGAGAATCTTGTGCATGGATCAAATCTTGAAGTCTCAGGTATCACTGCATCACAGGCCGATGTAGAAGTGTTGTTTGAGGTACCTGAGCTAGAAAAGGCTGAGTTTCTTGATCCAAATGGAGTTGATCCCCAACTACTTTGTAGCCAAGAATATGCAGCAAGAAGTGGCACAATAGGGCCATTTGGTTTGTTAGCTTTGGCTTCAAAGGATCTCAAAGAACACACTGCAATCTTCTTCAGAATTTATAGAACACCCAATACATATGTATGCCTCATGTGCAGTGACCAAAGCAGGTCCTCATTGAGGCATGACCTTGACAAAACCACATATGGAACTATCTTTGACATAGATTCAAATCTAAAAACGATTTCACTAAGAAGCTTGATTGACCACTCCATTATTGAGAGTTTTGGTGATGAAGGGAGAGTTTGTATCACTAGCAGAGTTTATCCATCATTGGCTATAGAGAAAGATGCTCATCTTTATGCATTTAACTATGGAAGCCAGAGTGTGGTGGTCTCAGAACTGAACGCTTGGAGCATGAAACAAGCAGAGATTGGGTATGAGGGAAACATAAGCTATACCTGA 1734 0.4175 MKIIAELLLFVAVPFLLNNGNGIQAFSTHSINSRATAKQPYRTSYHFQPQENWMNDPNGPMYYKGVYHLFYQHNPEAATFGDRIVWGHSVSYDLINWIHLNNAIEPSGAYDINSCWSGSATIIPGKEEPMILYTGIDDKKHQVQNLAVPKNLSDIFLREWVKHSENPVMTPPSGVEVDNFRDPSTAWQGKDGKWRVVVGAQNGDEGKAILYQSEDFVNWKVDPNPFYASQNTGVCECPDFFPVYMNGSTNGVDTSVQNPSVRHVLKISYLSKLHDYYFLGKYASDQGNFIPDVRFTGTSSDLRYDYGKFYASKSFFDHAKNRRILWGWVNESDSTQDDIQKGWAGLQTIPRQVWLDKSGKRLVQWPLEELEQLRGKHIRITGENLVHGSNLEVSGITASQADVEVLFEVPELEKAEFLDPNGVDPQLLCSQEYAARSGTIGPFGLLALASKDLKEHTAIFFRIYRTPNTYVCLMCSDQSRSSLRHDLDKTTYGTIFDIDSNLKTISLRSLIDHSIIESFGDEGRVCITSRVYPSLAIEKDAHLYAFNYGSQSVVVSELNAWSMKQAEIGYEGNISYT 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00529 577 Gene3D Glycosyl hydrolase domain; family 43 51 378 IPR023296 -
Viun8g00529 577 CDD GH32_Fruct1-like 52 355 - -
Viun8g00529 577 Gene3D - 379 563 - -
Viun8g00529 577 SUPERFAMILY Concanavalin A-like lectins/glucanases 366 565 IPR013320 -
Viun8g00529 577 SMART glyco_32 46 523 IPR001362 GO:0004553|GO:0005975
Viun8g00529 577 Pfam Glycosyl hydrolases family 32 C terminal 369 562 IPR013189 -
Viun8g00529 577 Pfam Glycosyl hydrolases family 32 N-terminal domain 46 366 IPR013148 -
Viun8g00529 577 ProSitePatterns Glycosyl hydrolases family 32 active site. 46 59 IPR018053 GO:0004553|GO:0005975
Viun8g00529 577 SUPERFAMILY Arabinanase/levansucrase/invertase 37 366 IPR023296 -
Viun8g00529 577 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 32 568 - -
Viun8g00529 577 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 378 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00529 Viun-Chr8 3814156 3817015 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00529 56 568 Glycoside Hydrolase AT1G55120 55.067 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00529 - K01193 gmx:100777487 1066.99