Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00528 ATGGAGATCAATGGAGAGGTTGCATCCTCACACAACCTCAATTCTACCATGTTCAAGCTACCTCAGAAACAACCTTACAGAACTTGCTACCACTTTCAACCACCACAATATTGGATGAATGATCCAAATGCACCAATGTACTACAGAGGAGTTTACCACTTTTTCTACCAACATAATCCTGATGCAGCAACCTTCGGTGAGAAAATGGTGTGGGCTCACTCTGTGTCCTATGATCTCATAAACTGGATTCATCTGAACCATGCTATTGAGCCAAGTGAGCCGTTTGATGTGAACAGTTGTTGGTCAGGCTCAGCCACTGTGATCCCAGAAAAAGAACAACCTGTGATTCTGTACACAGGAATTGATGATAAAAAGCATCAAGTTCAAAACATGGCTATGCCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGGTGAAACACCCTCAAAACCCTGTCATGACTCCACCAAGTGGGGTTGAAGTTCATAATTTCAGAGACCCTTCAACTGCATGGCAGGGAAAGGATGGAAAATGGAGGGTAGTCATTGGTGCTCAAAATGGTGATGAAGGGAAGGTAGTTCTTTACCAAAGTGAGGATTTTGCAGATTGGAAAGTGAAATTGAATCCTTTTTTTGCATCAGATAATACTGGAGTTTGTGAGTGTCCAGATTTTTTTCCTGTTTCCGTCAATGGCACAAATGGGGTGGATACATCTGTCCAAAATCAAAGTGTTAGACATGTGTTGAAGATAAGCTATCTACGCAGACATCAGGACTATTATTTTCTTGGTGAATATGCCAATGGTGATGGAAACTTTGTTCCTGATGTAAAATTCACAGGAACTAGTTTGGACTTAAGGTTTGACTATGGTAAATTTTATGCCTCAAAGTCTTTTTTTGACCATGCTAAGAGCAGAAGGATACTATGGGGGTGGGTGAACGAATCTGACACTAGACATGATGACATTGAGAAAGGATGGGCTGGTCTTCAGTGTATTCCAAGGCAAGTTTGGCTTGATGAAAATGGAAACCGGTTAATGCAGTGGCCAATTGAAGAGGTAGAAAAGCTGCGTGGCAAACAAATTAGCATAAAGGGAGAGAAACTTGTTGGTGGATCAATTCTTGAAGTTTCAGGTATCACAGCATCACAGGCTGATGTAGAAGTGTTGTTTGAGGTTCCGGAAATAGAGAATGCAGAGTTTTTAGATGAAAGTGAAGTTGATCCTGAGTTACTGTGTAGTGAAGAATATGCATCAAGAAGTGGCACAATAGGGCCATTTGGTTTGTTTGCTTTAGCATCTGAGGATCAAACAGAACACACTGCAATCTTCTTCAGAATATACAAAACCTCCAATAGATATGTATGTTTGATGTGCAGTGATCAAAGCAGGTCTTCATTGCGGGAGAACCTTGATAAATCCAAGTATGGAACCATCTTTGACATAGATCCTAATAAAAAAACAATTTCACTCAGAAGTTTGATTGATCGGTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATTACGAGTAGAGTTTATCCCTCGTTGGCGATTGAGAAAGATGCTCGTGTTTTTGCATTCAATAATGGAAGGAAGAGTGTGGTGATTTCAGAACTGAATGCTTGGAGCATGAAGCATGCAGAATTTGGCCAAGACGAAAGCATATATCAGTAG 1683 0.4064 MEINGEVASSHNLNSTMFKLPQKQPYRTCYHFQPPQYWMNDPNAPMYYRGVYHFFYQHNPDAATFGEKMVWAHSVSYDLINWIHLNHAIEPSEPFDVNSCWSGSATVIPEKEQPVILYTGIDDKKHQVQNMAMPKNLSDPFLREWVKHPQNPVMTPPSGVEVHNFRDPSTAWQGKDGKWRVVIGAQNGDEGKVVLYQSEDFADWKVKLNPFFASDNTGVCECPDFFPVSVNGTNGVDTSVQNQSVRHVLKISYLRRHQDYYFLGEYANGDGNFVPDVKFTGTSLDLRFDYGKFYASKSFFDHAKSRRILWGWVNESDTRHDDIEKGWAGLQCIPRQVWLDENGNRLMQWPIEEVEKLRGKQISIKGEKLVGGSILEVSGITASQADVEVLFEVPEIENAEFLDESEVDPELLCSEEYASRSGTIGPFGLFALASEDQTEHTAIFFRIYKTSNRYVCLMCSDQSRSSLRENLDKSKYGTIFDIDPNKKTISLRSLIDRSIIESFGEKGRICITSRVYPSLAIEKDARVFAFNNGRKSVVISELNAWSMKHAEFGQDESIYQ 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00528 560 SMART glyco_32 31 507 IPR001362 GO:0004553|GO:0005975
Viun8g00528 560 SUPERFAMILY Concanavalin A-like lectins/glucanases 350 549 IPR013320 -
Viun8g00528 560 SUPERFAMILY Arabinanase/levansucrase/invertase 23 351 IPR023296 -
Viun8g00528 560 Pfam Glycosyl hydrolases family 32 C terminal 353 546 IPR013189 -
Viun8g00528 560 Pfam Glycosyl hydrolases family 32 N-terminal domain 31 350 IPR013148 -
Viun8g00528 560 ProSitePatterns Glycosyl hydrolases family 32 active site. 31 44 IPR018053 GO:0004553|GO:0005975
Viun8g00528 560 Gene3D - 363 547 - -
Viun8g00528 560 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 22 551 - -
Viun8g00528 560 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 362 547 - -
Viun8g00528 560 Gene3D Glycosyl hydrolase domain; family 43 36 362 IPR023296 -
Viun8g00528 560 CDD GH32_Fruct1-like 37 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00528 Viun-Chr8 3799654 3802410 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00528 41 555 Glycoside Hydrolase AT1G55120 52.952 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00528 - K01193 gmx:100806220 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00528 8 3799654 3802410 Viun8g00528 8 3799654 3802410 ECH