Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00527 ATGGAGACCAACGCATCTTCTGACAACATCAGTTCAAACAAGTACATGGTACCTGAAAAACAGCCTTACCGAACCTGGTACCACTTTCAACCCCCACAAAATTGGATGAATGATCCAAATGGACCAATGTACTACAAAGGGGTTTACCACTTTTTCTATCAATTCAACCCTTATGCACCAACCTTTGGTAGTTATATGGTATGGGGTCATTCTGCATCCTATGATCTCATCAATTGGATTCATCTAAATCATGCTCTTGAACCAAGTGAATCCTATGACATCAATGGCTGCTATTCTGGCTCAATCACAACCCTCCCTGGGGAAAAACCAATCATTATGTATACAGGGAGTGATTCCAACAAACATCAAGTTCAGAACTTGGCTGTGCCAAAGAATCTATCAGACCCCTTCTTAAGGGAATGGGAGAAACACCCTCAAAACCCTATCTTGATTCCACCCAGTGGAGTTGAAGTGGATGGTTTTAGAGACCCTACAACTGCATGGAAAGGGAGTGATGGCAAGTGGAGAGTGGTTATTGGTGCCAAAAATGGTGATGAAGGGAAGGCTCTTCTCTACTACAGTGAGGATTTTGTTGATTGGAAACTGTTTCCTGATCCTATGTATGCATCAGAAAACACTGGCATGTTTGAGTGTCCAGATTTTTTTCCAGTGTACATCAGTGGCACAAAGAAAGGGGTGGATACATCTGTCAACAACAGCAGTGTTAAGCATGTCTTGAAAACCAGCTATCAGAACAAACAGCTAGAATACTATTTTCTTGGTGACTATTTCCTTGACCAGGAAAAGTTTGTTCCTGATGCTGATTTGGGAGGACCAAATCTGAACTTAATATTAGACCATGGAATGTTTTATGCTTCCAAGTCATTTTTTGACTATGCCAAAAACAGAAGGATATTGTGGGGATGGTCAAAGGAGTGTGACACTACGCAAGATGATTATGAGAAAGGATGGGCTGGTTTACAGTGTATTCCAAGGCAAGTTTGGCTTGATGAAAGTGGGAAATGGTTAATGCAGTGGCCAATTGAAGAGGTAGAAAAGCTACGTGACAAACAGATTAGCATAAAGGGAGAGAAACTTGCTGGTGGATCAATTGTTGAAGTCTCAGGTATCACTGCATCACAGGCTGATGTAGAAGTGTTGTTTGAGGTTCCGGAAATAGAGAATGCAGAGTTTTTAGATGAAAGTGAAGTTGATCCTGAGTTACTGTGTAGTGAAGAATATGCATCAAGAAGTGGCACAATAGGGCCATTTGGTTTGTTTGCTTTAGCATCTGAGGATCAAACAGAACACACTGCAATCTTCTTCAGAATATACAAAACCTCCAATAGATATGTATGTTTGATGTGCAGTGATCAAAGCAGGTCTTCATTGCGGGAAAACGTTGATAAATCCTCGTATGGAACCATCTTTGACATAGATCCTAATCAAAAAACAATTTCACTCAGAATCTTGATTGATCGTTCCATTATTGAGAGTTTTGGGGAGAAAGGGAGAATTTGTATAACCAGTAGAGTTTATCCCTCATTGGCTATAGACAAAGATGCACATCTTCATGTATTCAACAATGGAACACAGAGTGTGGTGATCTCAGAACTGAATGCTTGGAGCATGAATAAAGCAGAATTTGTACAAGAAGAGAGCATAAAATAG 1671 0.4039 METNASSDNISSNKYMVPEKQPYRTWYHFQPPQNWMNDPNGPMYYKGVYHFFYQFNPYAPTFGSYMVWGHSASYDLINWIHLNHALEPSESYDINGCYSGSITTLPGEKPIIMYTGSDSNKHQVQNLAVPKNLSDPFLREWEKHPQNPILIPPSGVEVDGFRDPTTAWKGSDGKWRVVIGAKNGDEGKALLYYSEDFVDWKLFPDPMYASENTGMFECPDFFPVYISGTKKGVDTSVNNSSVKHVLKTSYQNKQLEYYFLGDYFLDQEKFVPDADLGGPNLNLILDHGMFYASKSFFDYAKNRRILWGWSKECDTTQDDYEKGWAGLQCIPRQVWLDESGKWLMQWPIEEVEKLRDKQISIKGEKLAGGSIVEVSGITASQADVEVLFEVPEIENAEFLDESEVDPELLCSEEYASRSGTIGPFGLFALASEDQTEHTAIFFRIYKTSNRYVCLMCSDQSRSSLRENVDKSSYGTIFDIDPNQKTISLRILIDRSIIESFGEKGRICITSRVYPSLAIDKDAHLHVFNNGTQSVVISELNAWSMNKAEFVQEESIK 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00527 556 Pfam Glycosyl hydrolases family 32 N-terminal domain 28 347 IPR013148 -
Viun8g00527 556 Gene3D Glycosyl hydrolase domain; family 43 33 359 IPR023296 -
Viun8g00527 556 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 19 549 - -
Viun8g00527 556 SMART glyco_32 28 504 IPR001362 GO:0004553|GO:0005975
Viun8g00527 556 Pfam Glycosyl hydrolases family 32 C terminal 350 543 IPR013189 -
Viun8g00527 556 SUPERFAMILY Concanavalin A-like lectins/glucanases 347 546 IPR013320 -
Viun8g00527 556 CDD GH32_Fruct1-like 34 336 - -
Viun8g00527 556 SUPERFAMILY Arabinanase/levansucrase/invertase 20 348 IPR023296 -
Viun8g00527 556 FunFam Beta-fructofuranosidase, insoluble isoenzyme CWINV1 359 544 - -
Viun8g00527 556 ProSitePatterns Glycosyl hydrolases family 32 active site. 28 41 IPR018053 GO:0004553|GO:0005975
Viun8g00527 556 Gene3D - 360 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00527 Viun-Chr8 3789943 3793038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00527 38 549 Glycoside Hydrolase AT1G55120 52.591 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00527 - K01193 gmx:100806753 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00527 8 3789943 3793038 Viun8g00527 8 3789943 3793038 ECH