Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00518 ATGGACCCTCCCGCAACCTACATTTCCTCCTCCCAACTTCGCACCCACAACACGCGCCACGACGCGTGGATCTCAATCCACGGCAAAATCTACGACGTCTCCTCCTGGCTCCACCGCCATCCCGGCGGCGCCCTCCCGCTTCTCACCGTCGCCGGCACAGACGCCACTGACGCCTTCCTCGCCTTCCACCCGCCCTCCGCCGCCGCCCTCCTCCCCGCATTCTCCACTGGCGCCCTCCTCTCCGACTACGCCGTCTCCGCCGCCTCCTCCGACTACCGGAAGCTCCACTCCAAGCTCTCCGAACTCAACCTCTTCGAACGCAAGGGCCACACCACCCTCATCTTGCTCTCCCTCATCCTCACCCTCCTCCCTCTCTGCGTCTGCGGCGTCGTCTTCTCCGACAGCACGTTCGTTCACTTGCTCTCCGGCGCCATGATCGGCTTCCTCTGGATTCAGAGCGGCTGGATTGGCCATGACTCCGGCCACTACAACGTCATGCTCAACCGCCGCCTCAACCGCGCCGCGCAGATCCTTTCCGGCAACGTTCTCGCCGGAATCAGCATTGCCTGGTGGAAGTGGAACCACAACGCGCACCACATTGCGTGCAACAGCCTCGACTTCGACCCAGATCTTCAGCACCTACCATTCTTCGTGGTCTCCTCTAAGTTTTTCAACTCCCTGACTTCCAGATTTTACGATAGAAAGCTCTATTTCGATTCCCTCGCTAGGTTTTTGGTCAGTTACCAGCATTGGACTTACTACCCCGTCATGTGCTTCGCCAGGGTTAACCTTTTTGCTCAGTCTTTTTTCCTTTTGTTGTCGAACAGAAAAGTGGAGAGCAGAGGAATTGAGCTTTTAGGGTTGCTTTCGTTTTGGATTTGGTACCCTTTGTTGGTCTCCTTCTTGCCAAATTGGTGGGAGAGGGTTTTGTTCGTTGTGACAAGCTTTTCTGTGACGGGTATTCAGCATGTGCAGTTTTGCTTGAACCATTTCTCTTCCAAAGTTTACCTTGGTCCTCCAAGTGGTGATGACTGGTTTGAGAAGCAGACTAATGGGACTCTTGATGTCAGCTGTTCTGCTTGGATGGACTGGTTTCATGGTGGCCTGCAGTTTCAGGTGGAGCACCATTTGTTTCCCCGGCTACCGCGCTGCCATCTGAGAAAGATCGCGCCTTTGGTTAAGGATTTGTGCAAGAAGCATAACCTTCCCTACAATTGTGTGTCCTTTTGGAAGGCCAATGTCCTCACAATTCAGACACTGCGAAACGCGGCGTTGCAGGCCAGGGATGGATCTGGGCCGGCTCCCAAGAATTTGGTTTGGGAGGCTGTTAACACCCATGGATGA 1344 0.5506 MDPPATYISSSQLRTHNTRHDAWISIHGKIYDVSSWLHRHPGGALPLLTVAGTDATDAFLAFHPPSAAALLPAFSTGALLSDYAVSAASSDYRKLHSKLSELNLFERKGHTTLILLSLILTLLPLCVCGVVFSDSTFVHLLSGAMIGFLWIQSGWIGHDSGHYNVMLNRRLNRAAQILSGNVLAGISIAWWKWNHNAHHIACNSLDFDPDLQHLPFFVVSSKFFNSLTSRFYDRKLYFDSLARFLVSYQHWTYYPVMCFARVNLFAQSFFLLLSNRKVESRGIELLGLLSFWIWYPLLVSFLPNWWERVLFVVTSFSVTGIQHVQFCLNHFSSKVYLGPPSGDDWFEKQTNGTLDVSCSAWMDWFHGGLQFQVEHHLFPRLPRCHLRKIAPLVKDLCKKHNLPYNCVSFWKANVLTIQTLRNAALQARDGSGPAPKNLVWEAVNTHG 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00518 447 CDD Delta6-FADS-like 140 402 - -
Viun8g00518 447 PIRSF FA_sphingolip_des 2 435 IPR012171 GO:0016491
Viun8g00518 447 Gene3D - 5 98 IPR036400 -
Viun8g00518 447 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 5 80 IPR036400 -
Viun8g00518 447 SMART Cyt_b5_2 8 80 IPR001199 -
Viun8g00518 447 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 80 IPR001199 -
Viun8g00518 447 Pfam Cytochrome b5-like Heme/Steroid binding domain 10 77 IPR001199 -
Viun8g00518 447 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Viun8g00518 447 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Viun8g00518 447 PRINTS Cytochrome B5 signature 67 79 IPR001199 -
Viun8g00518 447 Pfam Fatty acid desaturase 137 406 IPR005804 GO:0006629
Viun8g00518 447 PANTHER FATTY ACID DESATURASE 2 5 428 IPR012171 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00518 Viun-Chr8 3727239 3729325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00518 7 447 Lipid Metabolism Gene Families AT2G46210 61.451 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00518 K21737 - gmx:100776476 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00518 8 3727239 3729325 Viun8g00518 8 3727239 3729325 ECH