Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00491 ATGTCGTCTTATTCCGAGAACGACGACGAGGCTCTCCGGCGCAAGCGCATCCTCTCCAGCAAGCTATACTTCGATGTGTCCCCGTCCAAGGTTCCGCTAATCTACTCCGCATCCTACGATATATCGTTTCTCGGCATAGAGAAACTGCATCCGTTTGATTCGTCGAAGTGGGGACGCATTTGCCGATTCCTCGTTTCGTTTGGTATTCTCGACAAAGGAAGCATCGTTGAGCCTCTCGAAGCTTCCAAGGATGATCTTCTAGTGGTTCACACAGAATTGTATCTGAATAGCCTGAAGGAGAGTTCAAAAGTTGCTATGATAGTTGAGGTCCCTCCCGTGGCATTAATTCCCAATTGTCTTGTGCAACAAAAAGTTCTTTTCCCATTCAAGAAGCAGGTTGGAGGAACTGTACTGGCTGCAAAACTTGCAAAGGAGAGAGGATGGGCCATTAATGTGGGAGGAGGTTTTCATCACTGCTCTGCAGAAAAAGGAGGTGGATTCTGTGTTTATGCAGATATTTCTCTTTGCATCCACTTTGCTTTTGTTCAGTTGAATATATCAAGGGTGATGATCATTGATCTTGATGCACATCAAGGAAACGGCCATGAAATGGACTTTGCCTGTGATAGCCGAGTCTATATCTTGGATATGTACAATCCTGGAATCTATCCTTTGGATTACGAGGCGAGAAACTACATAAATCAGAAAGTTGAAGTAAAGAGTGGGACACTTACAGAAGAGTACCTGCAAAAATTAGATGAAGCACTAGAGGTTGCTGGGCGTAGGTTTAACCCTGAGTTGGTAATTTATAATGCTGGAACCGACATCCTACAAGGAGATCCGTTAGGAAGGTTGGAGATCAGTCCTGAAGGAATTGCCCTTAGAGATGAAAAAGTTTTTCGGTTTGCTCGCGAGAAGAACATTCCCATCGTCATGCTCACTTCAGGTGGTTACATGAAATCTAGTGCTAGAGTGATTGCAGATTCAATAGTCAATCTTTCCAATAAATGCTTGATTGAAACGGGTGGAGCTCCAAAGTCTGCATAA 1047 0.4413 MSSYSENDDEALRRKRILSSKLYFDVSPSKVPLIYSASYDISFLGIEKLHPFDSSKWGRICRFLVSFGILDKGSIVEPLEASKDDLLVVHTELYLNSLKESSKVAMIVEVPPVALIPNCLVQQKVLFPFKKQVGGTVLAAKLAKERGWAINVGGGFHHCSAEKGGGFCVYADISLCIHFAFVQLNISRVMIIDLDAHQGNGHEMDFACDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTLTEEYLQKLDEALEVAGRRFNPELVIYNAGTDILQGDPLGRLEISPEGIALRDEKVFRFAREKNIPIVMLTSGGYMKSSARVIADSIVNLSNKCLIETGGAPKSA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00491 348 CDD HDAC_classIV 50 333 IPR044150 GO:0004407|GO:0016575
Viun8g00491 348 Pfam Histone deacetylase domain 50 331 IPR023801 -
Viun8g00491 348 SUPERFAMILY Arginase/deacetylase 28 333 IPR023696 -
Viun8g00491 348 PRINTS Histone deacetylase superfamily signature 265 275 IPR000286 -
Viun8g00491 348 PRINTS Histone deacetylase superfamily signature 188 203 IPR000286 -
Viun8g00491 348 PRINTS Histone deacetylase superfamily signature 154 177 IPR000286 -
Viun8g00491 348 Gene3D Histone deacetylase domain 31 342 IPR037138 -
Viun8g00491 348 PANTHER HISTONE DEACETYLASE 2-RELATED 31 333 - -
Viun8g00491 348 FunFam Histone deacetylase 11 31 340 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00491 K11418 - gmx:100781276 641.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00491 8 3565249 3571260 Viun8g00491 8 3565249 3571260 ECH