Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00489 ATGGCTTCAACTCAGCACCATGTGCAGGGCCTAACGGCGGAGGAAGAAACAGAACTAGAACCGGTGATAAAAAAATACCACCTTTTCGAACACTGTCCCGACAAATGTTCTTCCATAATATCGTACCGCATCGATGCTCCTGCGAGCACGGTTTGGCCGTTCGTGAGAAGCTTCGAGAACCCTCAGAAATACAAGCACTTCATCAAAGGCTGCAGCATGAGAGGCGACGGTGGCGTCGGAAGCATAAGAGAAGTAACCGTTGTTTCTGGTCTTCCGGCGTCGACCAGCACCGAGAGGCTCGAGATTTTGGACGATGAGAAACACGTGCTCAGCTTTAGGGTGGTCGGCGGCGAGCACCGACTCAAAAACTACCGTTCCGTTACGTCGGTGAACGAGTTCAAGAAAGAGGGTAGGGTTTACACCATCGTATTGGAATCGTATATCGTAGACATACCCGAAGGGAATACGGAGGAAGATACCAAGATGTTTGTGGACACCGTCGTAAAACTCAACCTTCAGAAACTTGGGGTCGTGGCCATGGCTTCTTCTTCTTCTTCATCCATGCATGGACAATGA 576 0.5 MASTQHHVQGLTAEEETELEPVIKKYHLFEHCPDKCSSIISYRIDAPASTVWPFVRSFENPQKYKHFIKGCSMRGDGGVGSIREVTVVSGLPASTSTERLEILDDEKHVLSFRVVGGEHRLKNYRSVTSVNEFKKEGRVYTIVLESYIVDIPEGNTEEDTKMFVDTVVKLNLQKLGVVAMASSSSSSMHGQ 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00489 191 FunFam Abscisic acid receptor PYR1 1 188 - -
Viun8g00489 191 SUPERFAMILY Bet v1-like 37 176 - -
Viun8g00489 191 Gene3D - 1 190 IPR023393 -
Viun8g00489 191 Pfam Polyketide cyclase / dehydrase and lipid transport 43 175 IPR019587 -
Viun8g00489 191 PANTHER - 36 176 - -
Viun8g00489 191 CDD PYR_PYL_RCAR_like 36 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00489 Viun-Chr8 3538746 3539927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00489 K14496 - gmx:100778183 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02132 10 36187293 36191119 Viun8g00489 8 3538746 3539927 ECH
Viun8g00489 8 3538746 3539927 Viun8g00489 8 3538746 3539927 ECH
Viun8g00489 8 3538746 3539927 Viun9g03303 9 39826773 39827880 PCT