Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00459 ATGGCTTCTTCTTCTCCTCCTCCTTCTTCTCCTCCTTCTTCTCCCTCTTTTCTCACACACCTTCCTCTTCATCCTCCTTCTTCATCTGACCAAGGTGAGAAGCGTGTGGAGGAGGATGAATCGCGCGTTCCGATTCACATCGTGACGGCGGCGTCGCAACTTCCCGTCGAGTTCCTGGAACCCTCGCCTCAATCGAAGCTCGTCATTGGCTTTGACTGCGAGGGTGTTGACTTGTGTCGCAAAGGCACTCTATGCATAATGCAGCTTGCGTTTCCTGACGCTGTGTACTTAGTCGATGCGATTGAAGGGGGAGAAGAGCTTATCAAAGCGTGTAAGCATGCACTTGAATCTAATTACATCACAAAAGTGATTCATGATTGCAAACGGGACAGTGAGGCACTCTTCTTTCAGTTTGGCATCAAGTTGAACAATGTGGTGGATACTCAGATTGCTTACTCACTAATAGAGGATCAAGAAGGACGAACGAGATTGCGAGATGACTACATTTCATTTGTTGGCCTCCTTGCTGATCCACGTTATTGTGGCATATCATATGTTGAGAAGGAAGAAGTTCGTGACCTCCTTCGACAGGACCCTCAGTTCTGGACACACCGACCATTATCTGAACTAATGGTCCGTGCTGCTGCTGATGATGTTCGTTTTCTTCTCTACATTTATCACCAAATGATGGAGAAATTAAATGAGCGGTCTTTATGGTATCTTGCAGTTCGTGGTGCCTTGTATTGCCGTTGTTTCTGTGTGAACAGTAACGACTTTGCTGATTGGCCATCTCTACCTTCGATACCAGATAGCTTGAATGCTGATGGTAATGGTCCCGAGGAGGAAATTCTTTCAGTTCTTGATGTTCCCCCAGGAAAGATGGGACGTGTTATTGGGAAAAGAGGGGCGACAATTTTGTCAATTAAGGCTTCTTGCAATGCGGAAATTCACACCGGAGGTCCCAAGGGCCCACCTGACAAGGTCTTTATCATCGGACCCGTGAGGGAAGTGAGGAAAGCCGAGGCCATGTTTCGGGGTAGAATCTTGGACATGTAG 1056 0.4735 MASSSPPPSSPPSSPSFLTHLPLHPPSSSDQGEKRVEEDESRVPIHIVTAASQLPVEFLEPSPQSKLVIGFDCEGVDLCRKGTLCIMQLAFPDAVYLVDAIEGGEELIKACKHALESNYITKVIHDCKRDSEALFFQFGIKLNNVVDTQIAYSLIEDQEGRTRLRDDYISFVGLLADPRYCGISYVEKEEVRDLLRQDPQFWTHRPLSELMVRAAADDVRFLLYIYHQMMEKLNERSLWYLAVRGALYCRCFCVNSNDFADWPSLPSIPDSLNADGNGPEEEILSVLDVPPGKMGRVIGKRGATILSIKASCNAEIHTGGPKGPPDKVFIIGPVREVRKAEAMFRGRILDM 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00459 351 PANTHER EGALITARIAN, ISOFORM B 37 349 - -
Viun8g00459 351 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 276 349 IPR036612 GO:0003723
Viun8g00459 351 SMART 35exoneu6 45 234 IPR002562 GO:0003676|GO:0006139|GO:0008408
Viun8g00459 351 Gene3D - 9 249 IPR036397 GO:0003676
Viun8g00459 351 Gene3D K Homology domain, type 1 272 348 IPR036612 GO:0003723
Viun8g00459 351 MobiDBLite consensus disorder prediction 1 41 - -
Viun8g00459 351 MobiDBLite consensus disorder prediction 1 19 - -
Viun8g00459 351 ProSiteProfiles Type-1 KH domain profile. 282 344 - -
Viun8g00459 351 Pfam 3'-5' exonuclease 63 233 IPR002562 GO:0003676|GO:0006139|GO:0008408
Viun8g00459 351 SUPERFAMILY Ribonuclease H-like 35 256 IPR012337 -
Viun8g00459 351 CDD KH-I 286 343 - -
Viun8g00459 351 CDD Egl_like_exo 58 253 - -
Viun8g00459 351 SMART kh_6 281 349 IPR004087 GO:0003676
Viun8g00459 351 Pfam KH domain 287 344 IPR004088 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00459 K18740 - gmx:100810098 607.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00459 8 3374953 3381794 Viun8g00459 8 3374953 3381794 ECH