Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00385 ATGAAGCTATCATTTTCTGCTATGCTGCTTCTGTGCCTTCTCCTCAGTTCCTCCTTCTTCTTCGAACTGTCATCTGCAGGTTCTGGTTTCTGTGCCTCAAAGTGCGCGCAGAGGTGCTCAAAGGCAGGGATGAAGGACAGGTGCATGAAGTTCTGTGGAATCTGCTGCAGCAAGTGCAAGTGTGTGCCCTCTGGGACTTATGGCAACAAGCACGAGTGCCCTTGTTACAGGGACCTTAAGAACTCTAAGGGCAAGGGAAAGTGCCCTTAA 270 0.5037 MKLSFSAMLLLCLLLSSSFFFELSSAGSGFCASKCAQRCSKAGMKDRCMKFCGICCSKCKCVPSGTYGNKHECPCYRDLKNSKGKGKCP 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00385 89 Pfam Gibberellin regulated protein 30 89 IPR003854 -
Viun8g00385 89 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00385 Viun-Chr8 2599328 2601123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00385 - - gmx:100305602 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00385 8 2599328 2601123 Viun7g03621 7 37314400 37315185 ECH
Viun8g00385 8 2599328 2601123 Viun8g00385 8 2599328 2601123 ECH
Viun8g00385 8 2599328 2601123 Viun9g03404 9 40433061 40434131 PCT