Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00323 ATGGAGGACGTTGAAGACAAGCCACCCCCAGAAACCTCTGTAATAATGGCTGAGCAGAAGCCGCTGGTAGAAACCCCTGAAGAAAACAGTGAAGTGATGATGGCTGGCACTGGTTTTCCCACAGAGTTCTCTGACTTAGAAGTGTCCCTAAATGCTTCTAACGATAAAACTATTGCACAAGTTGAACATCTTCCCACAGGTGATTCAGCTTCTACTCCTGAAGCTACAATTCATGGAACAGAAGAAACCCACCAAGAAGAAGATATCTTTAACAGGCAGAAGGAAGGAGTTTCTGCTGTCACTGCTAGCAGTGATGTTGATAATAATCTGATGAATCCCTCAACATCATCTTCTGAAACAAAAGAGTTGCAGAGTGGCTCCATAGAACTAATAACAGACTCACCTCAAACCATGGTTGCTGATGTTGCAGAAGATAATTCAGCTTCAACCTCAAAAGGTTCTGTTCATGAAACGGAACAAAGCAACCAAGGAGCCATGCCTGCAAATTCTGAAGCTGGAAAATTAGAAGATATGTCAAACAGGCAACAGGATGGCAGTGATGCTGATAATCAGATGGAGCCCTCAACTTCCTCTTTTAAGGAAAAAGAGTTACAGAATGTACCTCAAACAGTGGATACTGATGTTGTTGAGGAAGCTGTTGGCTCACATTCTGTTGCTGCTGGCAATGATGATGTTGATAATTCTTCTGAAAAAATAGAGTTGCTAAACGATCATAAAGAGCTAAAGATTGAACTGCCTCAAACCGAGGTGGAAGCTGTTGAGCCACCTGCTGCCAGTGATGAGATGGCTTCCTCTTCTGAACAAGTAGAGTTGCAGAATGATGAGGAAGAACAAAAGACAGATCCTTCTCAAGACAATGTTACTGATGTTGCTTTGAGAGGTGATGATTCACCATCTGCCAGTGATGATAGTGAGATGAAACTCTTGCAGGATGACCAGAAAGAACAGAAGACAGATCCATCTCAAACCAGTATTACTGATACTACTGTGGGAGCCACAGATTCACCTAGTTTTGTCAGGCAGATGACTGTAAGAAGAACCCTAATTGATACAGCTGCTCCATTTGAATCTGTCAAGGAAGCTGTTTCCAAATTTGGAGGCATTGTGGATTGGAAGGCTCATAGAATCCAGACAGTGGAGAGACGCAAACATGTAGAACATGAACATGAAAAGGCACAGCAGCTGATCCCGGAATGTAGAAAAAAGGCCGAGGCTGCAGAGAAAGAGAAAATGAGAGTGCTGCAGGAGCTGGATACCACTAAGAGACTAATAGAAGAGCTGAAACTGAACCTAGAGAGGGCTCAAACAGAAGAGCGTCAAGCAAGACAGGACTCAGAACTTGCAAAGCTGAGAGTGGAAGAGATGGAGCAAGGCATTGCAGATGACTCTAGTGTTGCAGCCAAGGCACAGCTTGAGGTAGCTAGAGCAAGGTATTCATCAGCTGTCACAGAGTTAACATCTATAAAAGAAGAGTTGGATGCATTGCGTGGCGAATATGCATCATTAGTTGTTGAAAAAGAAGAAGCTGTGAAGAAATCTGAAGAGGCTATTGCTTCATCAAAGCAAGTGGAGAAGACGGTGGAAGACTTGACTATTGAGCTGATAGCAACAAAGGAGGCACTGGAAAGTGCACATGCTGCACACATGGAAGCAGAGGAGCAGAGAATAGGAACAGTGATGGCAAAAGATCAGGATTGTCTTCTTTGGGAGACGGAACTTAACCAGGCAGAAGAAGAAGTCCAGAGTCTGAACCAGAAAATTTTGTCTGCTAAGGATCTCAAATCTAAACTGCAAGCAGCCTCAGCTTTGCTGCTTAATTTGAAAGCTGAATTAAGTCTTTATATGGAATCAAAGCCTGACCCAGAAGGTGGTGATGAAGGAGTCTCCAAAGAAGGGCAAGATAAACCAGCGAAGAAGACACACAGTGAAATACAAGAAGCAGTTGCATCAGCAAAAAAGGAACTTGAGGAGGTAAAGCTTAACATAGAGAAAGCCACCACTGAGGTAAATTACTTGAAGGTGGCCGTAGCCTCGTTAAAAACAGAACTTGAAAATGAGAAACTATCTTTTGCCTCCATGAGGCAAAGAGAGGGAATGGCTTCCATCGCAGCTGCATCTCTTGAAGGTGAACTGGAGAACACTGTATCAGAAACGGCTTTGGTTCAGATGAAGGAAAAGGAAGCGAGAGAGAAAATTGCTGTGCTACCAAAGAAACTACAAGAAGCAGTTGAAGAGAACAACGAGGCCAAATTGCTTGCTCAAGAAGCTCGTGAAGAGTTGCAGAGAGTGGAGGAGGAGGCTGAACAATTGAAGGCGAGTGCAAGCACATTGCAGAGCAAATTACTAGCAGCAGAAATGGAGATAGAAGCTGCAAGAGCTTCTGAAAGGTTGGCAATAGCAGCAGGTAAAGCATTGCAAGAGAGTGAGTCACCTAAGAGCAGCAAAACTGAAGTGGATTCATCCAATTGGGTGACACTTTCAGTGGAGGAGTACTATAATCTGAGCAAGCAAGCACATGATGCAGAAAAAGAAGCCAACATGAGGGTTGCAACAGCAAATTCTAGAATTGAAGCAGCGAAGGAGTCTGAACTGAGAACCTTGGAGAAGTTGAATGGTGTGACTAGAGAAATGGCTGCAAGAAGAGAATCTCTGAAGATGGCGATGGAGAAAGCTGAAAAGGCGAGGGAGGGAAAACTAGGTGTAGAACAAGAACTAAGAAAATGGAGGGCTGATCATGAGCAACGAAGAAAAGCTGGTTCAGCAGTAGGCAAAGAATTGGTTAAGCATCAAAGTAGTAAAAGTTCAGACGGTATTCTTGAAAGACACAAAACTCATCGTTTACCTATGCCTCTTCGTTACTTTTCCAGTTCAAAGTCTTATGTACATTCTAACGGTGGAGCGGCGGTGTCATCGCCGGATTCCAAGAGCGGAAAGAAGAAGAAGAAGTCATTCTTCCCATGGGTTTTGATGTTCTTTGGGAAGAAAAAGTCTCACACAACACATTCAGGGTGA 3033 0.4365 MEDVEDKPPPETSVIMAEQKPLVETPEENSEVMMAGTGFPTEFSDLEVSLNASNDKTIAQVEHLPTGDSASTPEATIHGTEETHQEEDIFNRQKEGVSAVTASSDVDNNLMNPSTSSSETKELQSGSIELITDSPQTMVADVAEDNSASTSKGSVHETEQSNQGAMPANSEAGKLEDMSNRQQDGSDADNQMEPSTSSFKEKELQNVPQTVDTDVVEEAVGSHSVAAGNDDVDNSSEKIELLNDHKELKIELPQTEVEAVEPPAASDEMASSSEQVELQNDEEEQKTDPSQDNVTDVALRGDDSPSASDDSEMKLLQDDQKEQKTDPSQTSITDTTVGATDSPSFVRQMTVRRTLIDTAAPFESVKEAVSKFGGIVDWKAHRIQTVERRKHVEHEHEKAQQLIPECRKKAEAAEKEKMRVLQELDTTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIADDSSVAAKAQLEVARARYSSAVTELTSIKEELDALRGEYASLVVEKEEAVKKSEEAIASSKQVEKTVEDLTIELIATKEALESAHAAHMEAEEQRIGTVMAKDQDCLLWETELNQAEEEVQSLNQKILSAKDLKSKLQAASALLLNLKAELSLYMESKPDPEGGDEGVSKEGQDKPAKKTHSEIQEAVASAKKELEEVKLNIEKATTEVNYLKVAVASLKTELENEKLSFASMRQREGMASIAAASLEGELENTVSETALVQMKEKEAREKIAVLPKKLQEAVEENNEAKLLAQEAREELQRVEEEAEQLKASASTLQSKLLAAEMEIEAARASERLAIAAGKALQESESPKSSKTEVDSSNWVTLSVEEYYNLSKQAHDAEKEANMRVATANSRIEAAKESELRTLEKLNGVTREMAARRESLKMAMEKAEKAREGKLGVEQELRKWRADHEQRRKAGSAVGKELVKHQSSKSSDGILERHKTHRLPMPLRYFSSSKSYVHSNGGAAVSSPDSKSGKKKKKSFFPWVLMFFGKKKSHTTHSG 1010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00323 1010 MobiDBLite consensus disorder prediction 96 168 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 63 78 - -
Viun8g00323 1010 Coils Coil 881 901 - -
Viun8g00323 1010 Coils Coil 746 801 - -
Viun8g00323 1010 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 356 993 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 968 988 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 184 212 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 233 254 - -
Viun8g00323 1010 Coils Coil 648 675 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 326 341 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 63 341 - -
Viun8g00323 1010 Coils Coil 396 460 - -
Viun8g00323 1010 Pfam Weak chloroplast movement under blue light 354 922 IPR008545 -
Viun8g00323 1010 Coils Coil 573 617 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 917 951 - -
Viun8g00323 1010 Coils Coil 492 519 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 79 93 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 626 655 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 623 655 - -
Viun8g00323 1010 MobiDBLite consensus disorder prediction 303 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00323 Viun-Chr8 2078623 2083359 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00323 - - gmx:100779436 1114.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00323 8 2078623 2083359 Viun8g00323 8 2078623 2083359 ECH
Viun8g00323 8 2078623 2083359 Viun9g03480 9 40910260 40915868 PCT