Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00226 ATGGAGTCCGAACTCCAAGACCTCGATCCGAAACCGCCGAAACAACCCGACCCGAACAATGACGAGCGTCCTCTCCTCAAGCCTTCCGCCGCCGACTCCTCCGGCGAGCTCGAGAAGAAATTCGCTGCGTTCGTGCGGCACGATGTTTACGGTTCCATGGGACGCGGTGAGTTACCGACGCGGGAGAAGGTGCTGCTGGGCGTGGCTTTTGTGACGCTGGTTCCGGTGAGGGTGGTGGCGATAACCACCATCCTGTTGCTCTATTACTTTATTTGTAGGGTTTGCACGATGTGCTCTGTCCCGAATCGCGTGGAGGAGCATCAGGAGGATTACGCGCACATTGTAGGGTGGAGGAGGATCGTCATTGTGCAGAGTGGAAGAGCCCTCGCCAGGGTCATGCTCTTCGTGTTCGGGTTTTATTGGATAACGCACACGTATCCGATTCCACCGGCTTCCGTTGAAAATTCTACCACCACCGACGAGCAGGAAGACAATGCTCAGTCTGAAGACACAAGACCCGGTGTTATAATATCTAATCATGTGTCATATTTGGATATTTTGTATCACTTGTATGCCTCGTTCCCGAGTTTTGTCGCTAAGAGATCAGTGGCTAAACTTCCTCTTCTTGGTCTCATGAGTAAGTGCCTTGGTTGCGTCCTGGTTCAACGGGAATCAAAGTCATCGGACTTTAAGGGTGTTTCAGCTGTTGTCACTGATAGGATTCGGGAAGCTCACCAAAATCCATCTGCTCCAATAATGATGTTATTCCCAGAAGGTACAACCTCAAATGGGGAATTTCTCCTTCCGTTCAAGAGTGGCGCTTTTTTAGCGAAAGCACCAGTACTTCCTGTAATTTTAACTTATCGTTACCAGAGATTTAGCCCTGCCTGGGAATCCATATCTGGCGTACGTCATATGATTTTTATTCTCTGTCAGTTTGTAAATTATATGGAGGTGATTCAGTTACCTACTTACTATCCCTCGCAGCAGGAGCAGGATGATCCCAAACTATATGCTAATAATGTTAGAAAGTTGATGGCCAGCGAGGGAAATTTGACACTTTCAGATATCGGGCTTGCTGAAAAACGAATATATCATGCAGCCCTCAACGGTTTGTTTTCCCAATGCTAA 1131 0.4828 MESELQDLDPKPPKQPDPNNDERPLLKPSAADSSGELEKKFAAFVRHDVYGSMGRGELPTREKVLLGVAFVTLVPVRVVAITTILLLYYFICRVCTMCSVPNRVEEHQEDYAHIVGWRRIVIVQSGRALARVMLFVFGFYWITHTYPIPPASVENSTTTDEQEDNAQSEDTRPGVIISNHVSYLDILYHLYASFPSFVAKRSVAKLPLLGLMSKCLGCVLVQRESKSSDFKGVSAVVTDRIREAHQNPSAPIMMLFPEGTTSNGEFLLPFKSGAFLAKAPVLPVILTYRYQRFSPAWESISGVRHMIFILCQFVNYMEVIQLPTYYPSQQEQDDPKLYANNVRKLMASEGNLTLSDIGLAEKRIYHAALNGLFSQC 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00226 376 MobiDBLite consensus disorder prediction 1 21 - -
Viun8g00226 376 Pfam Acyltransferase 166 284 IPR002123 GO:0016746
Viun8g00226 376 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 131 353 - -
Viun8g00226 376 SMART plsc_2 174 289 IPR002123 GO:0016746
Viun8g00226 376 MobiDBLite consensus disorder prediction 1 34 - -
Viun8g00226 376 PANTHER PHOSPHOLIPID ACYLTRANSFERASE 32 361 - -
Viun8g00226 376 CDD LPLAT_LPCAT1-like 130 363 IPR045252 GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00226 Viun-Chr8 1440704 1446979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00226 1 375 Acyl Lipid Metabolism Gene Families AT1G80950 60.358 7.26e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00226 K13510 - gmx:100820536 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00226 8 1440704 1446979 Viun9g03560 9 41333024 41338788 PCT