Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g04004 ATGGAATCGAAGGAAGAAACCGCCGGCGCCGGCGAGGCCAGCCTGGAGGGGCTGCCGTCGGCACTGGTGGCGACCGTCATGACGAAGCTGGACATCGCCTCCATCTGCTCTCTCGCCTCCACCTCCTCCGCCTTCCGCTCCTGCGGCCGCCACATCCTCTCCTTCCTCCCCTCCTTCAACCTCCTCGACACTGCTCCCTCCGGCGACATGCTCAGACCCTTGTTGCCGCCCAATCCCTACCTCACCACTCTCAAGCTCGATTGTTCCCGCCTCGACGACTCCGCCATCGCCTTCCTCCTCAAACCCTCCCTCCAAGACCTCTCTCTCCACAATTGCGCCGATTTCAGTGGCAGACTCTTGTCTGAGATCGGCAACCGCTGCAAAGATCTAAGGTCTCTCTACCTTGGCTCCGTCGCCGAGAAAAGAGGGAGGGCCATTCATATTTCCGATCTGGAGGAGTTGCTGAGCGGTTGCTCCCACTTGGAAGCACTGATTCTGATGTTTGATGTCTCTCTCTTTCTCCGGCACAACTTTGCTCGAGTCTGGGCTTCTGCTTCTGAGAAAATTTCTTCTCTTGAGATTGGCTACATTTCTTCAGTTACCGTCACTGAACTGCTGAGCCCAAATCTGGGATCCCATCTCCCCTCAAATCCTGTTCAACCGTCCATACTTCCGAGCATTCAGAAACTGTGTCTTAATGTAGACTATATAACTGATGCTATGATCGGCACAATATCCAAAGGTCTAGTCTTTTTGACGCATTTGGATCTTCAAGATGCACCATTGATTGAACCAAGAGTTACGTTTGACCTAACCAATGCTGGTCTTCAACAAATTAATCAACTTGGGAGACTGAAACATCTTTCGCTGGTTCGAAGCCAGGAGTTTCTCATTACGTACTTTCGAAGAGTGAATGATCTGGGATTGCTTCTAATGGCAGACAAGTGTGCAAACATGGAAAGCATATGCCTTGGTGGCTTTTGTCGAGTCACAGACACCGGTTTCAAAACCATCCTGCATTCTTGCACTCGCTTGTACAAGCTTAAGGTCACTCATGGCACTCATTTAACTGATCTAGTTTTTCATGATATTTCTGCAACATCCCTTACTTTGACACATGTTAGCTTAAGACGGTGCAATCTGTTAACAAACCATGCTGTTTTGAGTTTGGCATCGAACAAGGAACTCAAAATTCTTGACCTGAGAGATTGCAGAAGCCTGGGGGATGAAGCTCTATTGGCCATTGGCACTTTGCCTAGACTGAAAATTTTACTATTAGATGGTTCTGATATAACTGATGCAGGACTTCTGCACTTAAGAGCATCTGTTATCAGTTCATTGTATGCATTGTCTCTTCGCGGATGCAAGAGACTAACAGATAAATGTATCACAGCTCTATTTAATGGCTGCTGCGTGCTGGAATTGCGAGAACTGGATCTATCTAATCTTCCAAACCTCTCTGATAATGGAGTTCTGCTGCTTGCAAAAAGTAGGATTCCCTTCTTTGAGCTCCGAATGCGACAGTGCCCTCTAGTTGGTGACACTGCAGTGATGGCATTAGCTTCAATGCTGATTGACGAGGCCAAACATGGAAGCAGTTTGCGATTGTTGGATCTTTATAACTGTGGTGGCATTACAGCGCTTGCATTTCGGTGGTTGAAGAAACCGTATTTTCCGAGGCTCAAATGGTTGGGAGTGACAGGAAATGTTAACAGAGACATGGTAGATGCTTTAGCCAGAAGCAGACCTTTCTTACATGTGGCATGCCATGGCGAGGAGCTTGGGGCTGATCCCTACGATACTTCAGATGGGTTATACACACATGATTATGATGACGTGGATGAATTTGAGCAATGGCTTCTTGAAGCAGATATTGACAGTGACTTTGAAGACATGGGTGATGCTGAAAATAACGATGAAATGGTTGCGTGA 1932 0.4762 MESKEETAGAGEASLEGLPSALVATVMTKLDIASICSLASTSSAFRSCGRHILSFLPSFNLLDTAPSGDMLRPLLPPNPYLTTLKLDCSRLDDSAIAFLLKPSLQDLSLHNCADFSGRLLSEIGNRCKDLRSLYLGSVAEKRGRAIHISDLEELLSGCSHLEALILMFDVSLFLRHNFARVWASASEKISSLEIGYISSVTVTELLSPNLGSHLPSNPVQPSILPSIQKLCLNVDYITDAMIGTISKGLVFLTHLDLQDAPLIEPRVTFDLTNAGLQQINQLGRLKHLSLVRSQEFLITYFRRVNDLGLLLMADKCANMESICLGGFCRVTDTGFKTILHSCTRLYKLKVTHGTHLTDLVFHDISATSLTLTHVSLRRCNLLTNHAVLSLASNKELKILDLRDCRSLGDEALLAIGTLPRLKILLLDGSDITDAGLLHLRASVISSLYALSLRGCKRLTDKCITALFNGCCVLELRELDLSNLPNLSDNGVLLLAKSRIPFFELRMRQCPLVGDTAVMALASMLIDEAKHGSSLRLLDLYNCGGITALAFRWLKKPYFPRLKWLGVTGNVNRDMVDALARSRPFLHVACHGEELGADPYDTSDGLYTHDYDDVDEFEQWLLEADIDSDFEDMGDAENNDEMVA 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g04004 643 FunFam F-box/LRR-repeat protein 10 isoform A 52 468 - -
Viun7g04004 643 SUPERFAMILY RNI-like 305 571 - -
Viun7g04004 643 PANTHER UNCHARACTERIZED 363 553 - -
Viun7g04004 643 Gene3D Ribonuclease Inhibitor 419 599 IPR032675 -
Viun7g04004 643 Gene3D Ribonuclease Inhibitor 269 370 IPR032675 -
Viun7g04004 643 Gene3D Ribonuclease Inhibitor 19 264 IPR032675 -
Viun7g04004 643 Pfam Leucine Rich repeat 393 415 IPR001611 GO:0005515
Viun7g04004 643 SUPERFAMILY RNI-like 53 292 - -
Viun7g04004 643 SMART LRR_CC_2 368 393 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 101 126 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 503 523 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 394 418 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 316 341 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 444 469 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 531 556 IPR006553 -
Viun7g04004 643 SMART LRR_CC_2 472 497 IPR006553 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g04004 - - pvu:PHAVU_007G016400g 1209.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g04004 7 39550304 39552948 Viun7g04004 7 39550304 39552948 ECH