Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03987 ATGGGTAGCCCAAAGAAAGTGTCACCATCAACAAGAAGCCCAAAGAAAAGCTCAAGAACTCTCCATGATCTCTTTGTGCAGGAGAGTCCTCACTTCACCATTCCATCTTCTTCTCCCACTTCAGGAAATGAAGAACTTTTCTCCACTATTTCTTACTGCACCTTTGTTTTCACCTTCACCGATCCTTCAGAATCTCCGGCACAGAGAGATTCAAAGAGGCTGCAACTCACAAGACTCGTCTCTATATTGAAGTCTTCCAAGAAACCAGTGCACGGAAAAGTTCTGGTGGCTCTAGCGGCCATGATATCTGCCAACCTCTTCAGGCCACTCCCTCCACCTTCAAGCCCCTCTGCCATCACAGATTTGCCTGAAGAAGAATACCCAGTTTCTATATTTTCTCCTCTGTGGTCGCATCTGCAAATAGTTTACGAGATACTTCTCAAGCTTGTTAACAGCACCGACCAGAAGATACTGAGAGAGTGCATCGATCATTCTTTCCTCCGCAACCTGCTAGCACTTTTCCAGTCAGAAGATCCGAGGGAGCGTGAGACTTTGAAAAATGTGTACCACAAGATATATTCCAAGTTCATTTCTGATCGTTCCTTCATGAGGAAATCAATGACCGAGGTGCTCTTGAACTACGTTTTTGAGACAGAGAAGCATCCGGGTATTGCAGACTTGCTTGAGATATGGGGAACCATAATCAATGGGTTTACCGTGCCGCTCAAGGAAGAACACAAACTGTTCCTGATGAGAGTGCTGATTCCTCTACACAAGACCAAGGGGATGCAAGTGTACCATAGGCAATTGGCCTATTGCGTCTCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGGGTTGTTGTCAGAGGGGTTTTGAGGTATTGGCCTGTCACAAACTGTCAAAAAGAAATTTTGCTAATTGGGGAGTTGGAAGATCTGGTTGAGAATTTAGACCCTGACCAGTATCGTAAATTGGCCTTACCCCTGTGTACCCAGATTACCAAATGCATAAACAGTTGGAATTCACAGGTAGCGGAGCGTGCACTGTATATGTGGAACAATGAGCAGTTCGTGAAAATGGCACTGATAGGAACAGTGGAAGTGTTTAATGTGATTGTAGAAGGCATGGAGAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTTAGACAACTAACAGAAAGTGTGAAGGTGATGCTGGAAGAAATGGATCCAGATCTGTATTCCAAGGGTCTCATGGACATGGAAGCTAAAGAATCAATGGCACATCTAGAAGATATCAAAAGAAAAAAGAAATGGGAAAGAATAGAATGGGAAGCTGCCAAGAATCAGTTTCTCAACCCACAACGTTATATACGTGTCTCCTACTGA 1371 0.4457 MGSPKKVSPSTRSPKKSSRTLHDLFVQESPHFTIPSSSPTSGNEELFSTISYCTFVFTFTDPSESPAQRDSKRLQLTRLVSILKSSKKPVHGKVLVALAAMISANLFRPLPPPSSPSAITDLPEEEYPVSIFSPLWSHLQIVYEILLKLVNSTDQKILRECIDHSFLRNLLALFQSEDPRERETLKNVYHKIYSKFISDRSFMRKSMTEVLLNYVFETEKHPGIADLLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGGVVVRGVLRYWPVTNCQKEILLIGELEDLVENLDPDQYRKLALPLCTQITKCINSWNSQVAERALYMWNNEQFVKMALIGTVEVFNVIVEGMEKNLKWHWSKSVRQLTESVKVMLEEMDPDLYSKGLMDMEAKESMAHLEDIKRKKKWERIEWEAAKNQFLNPQRYIRVSY 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03987 456 MobiDBLite consensus disorder prediction 1 15 - -
Viun7g03987 456 SUPERFAMILY ARM repeat 45 435 IPR016024 -
Viun7g03987 456 MobiDBLite consensus disorder prediction 1 20 - -
Viun7g03987 456 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 39 438 - -
Viun7g03987 456 Gene3D - 39 438 IPR011989 -
Viun7g03987 456 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 25 444 IPR002554 GO:0000159|GO:0007165|GO:0019888
Viun7g03987 456 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 36 440 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03987 Viun-Chr7 39459285 39461512 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03987 K11584 - gmx:100802007 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03987 7 39459285 39461512 Viun7g03987 7 39459285 39461512 ECH