Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03960 ATGGAATCATCAGTGGTTGAAAACATTGTGATTGTGGGAGCTGGAATTGCTGGTCTTGCAACATCCTTGGCACTTCACAGGTTGGGTGTGAGAAGTTTGGTGTTGGAATATTCGGATAGTTTAAGGGTCACTGGATTTGGTTTAACAACATGGACAAATGCTTGGAAAGCCTTGGATGCTCTTGGTGTCGGAGACATTCTTCGTAACCAACATCTCCAACTACAACGGAATGTTACAACATCTTTGAGTCTGGGGCAGCAAACATCAAGCTTGAGCCTCATTGGAACAGGAAAACACGGAGACGGTGAAGTTCGATGTGTTCGGAGACAATTAATGATCGAAGCACTTGGTAACGAACTTCCAAGTGGGACGATTAGGTTCTCGTCAAAGGTTGTCGCAATTCAAGAATCTGGGTTCTTCAAGATAGTGCATCTTGCTGATGGAACAACCATAAAAACCAAGGTATTGGTTGGGTGTGATGGAATAAACTCTGTGGTGGCGAAATGGCTGGGCTTCAAGGAGGCATCTTTTACCGGGAGATACGTGATCAGGGGTGACATAAAGTTGACCAACAAACATGGCCTTCAACCAAATTTCATGCACTTCTTTGGAGAAGGCTTTCGATCGGGTGTTCTACCTTGTGATGACAAAACTGTGTATTGGTTTTTCACTTGGACTCCCACCACTGAAGAGAAGGAGCTAGTGAACAACCCAGCCAAAATGAAGAGATTGGTGTTGAACAAGTTTGAGAAGATGCCGAGTGATATAAGATGCTTTATAGAGAAAACAGAAACAGAAGATATCTTAACATCTCCATTGAGATATAGGCACCAGTGGGAGCTTGTGTTAGGAAATATCAGCAAAGGCAATGTTTGTGTTGTTGGAGATGCTTTTCACCCCATGGCACCTGACCTAGGTCAAGGTGGATGTTGTTCCTTGGAAGATGGGATTGTGTTAGGAAGATACTTAGCTCAGGCATTCTGCAAAAAAGGTGAGAGTGAGGAGCAATACAAGGAAATTGAAGCTAGCTTGAGGAAATATGCCAAAGAGAGAAGATGGAGAAGCATCGATATCAGTGTTACATCTTATGTTCTGGGGCTTCTTCTGCAAGGTGATTTGAAATTGGTGGCACATGTCAGGGACAAAGTTTTGCCTCACTTCTTAGCTGAGTTGTTGTTGAAGAAGTCAGATTTTGATTGTGGAAAACTCAACACCTCTGATTAA 1224 0.4314 MESSVVENIVIVGAGIAGLATSLALHRLGVRSLVLEYSDSLRVTGFGLTTWTNAWKALDALGVGDILRNQHLQLQRNVTTSLSLGQQTSSLSLIGTGKHGDGEVRCVRRQLMIEALGNELPSGTIRFSSKVVAIQESGFFKIVHLADGTTIKTKVLVGCDGINSVVAKWLGFKEASFTGRYVIRGDIKLTNKHGLQPNFMHFFGEGFRSGVLPCDDKTVYWFFTWTPTTEEKELVNNPAKMKRLVLNKFEKMPSDIRCFIEKTETEDILTSPLRYRHQWELVLGNISKGNVCVVGDAFHPMAPDLGQGGCCSLEDGIVLGRYLAQAFCKKGESEEQYKEIEASLRKYAKERRWRSIDISVTSYVLGLLLQGDLKLVAHVRDKVLPHFLAELLLKKSDFDCGKLNTSD 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03960 407 Pfam FAD binding domain 9 328 IPR002938 GO:0071949
Viun7g03960 407 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 7 404 IPR044560 -
Viun7g03960 407 Coils Coil 330 350 - -
Viun7g03960 407 SUPERFAMILY FAD/NAD(P)-binding domain 8 391 IPR036188 -
Viun7g03960 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Viun7g03960 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 288 303 - -
Viun7g03960 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 - -
Viun7g03960 407 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 303 319 - -
Viun7g03960 407 Gene3D - 8 383 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03960 Viun-Chr7 39320513 39323032 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03960 1 404 Miscellaneous Gene Families AT5G05320 48.780 3.21e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03960 - - gmx:100808968 660.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03960 7 39320513 39323032 Viun7g03960 7 39320513 39323032 ECH