Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03856 ATGCCCGAGATGGATGAGGGCGAGGTTATAGATCAACCTCTGACGGCCATAGCAGAGGCGTTTGAGGAGCTGTCGAAGTGGATGAAGGAGAATAACGACGGCAAACACATTCGCCTCGACACTTTCTGCGAGGCCGCCTCTCTCGTCTCCGTTCTCTTCCGTTGTCTCGGCCTCGCTTTCAAATTCGCTGAATTGGAATACGTCGCCAAGCTAGAAGGACTACTGGAAGCATCAAAGACATGTCCCACTCTAAAGGATATTCTTGAAGTTGATGTTGCCAGTGACACAGTGAAACAATCTGGAAGCTATTCCCGTAATCTGCGTAGAGTTCGGCAGGGTCTTGATCTCGTCAGAGCTATATTCGAACAACTTTTATCCACTGAAGATTCTTCTCTAAAAGAGGTGGCTTCAACAGCTTATGGGCAGGTTTGTGCACCATTTCACACATGGGCGGTACGAACAGCTGTGTACGCTGGGATGTATACACTTCCAACGAGAGAACAACTTTTGATGAAGCTCAATGAAACAGAGCAATCAGCCGAGAAGAAGATGAAAAGGTATATTGCTGCCTCACATCCGATTATAGAATACATTGATAGTCTGTACCTTTCTCGAAATATTACGTTGGACTGGTGA 636 0.4654 MPEMDEGEVIDQPLTAIAEAFEELSKWMKENNDGKHIRLDTFCEAASLVSVLFRCLGLAFKFAELEYVAKLEGLLEASKTCPTLKDILEVDVASDTVKQSGSYSRNLRRVRQGLDLVRAIFEQLLSTEDSSLKEVASTAYGQVCAPFHTWAVRTAVYAGMYTLPTREQLLMKLNETEQSAEKKMKRYIAASHPIIEYIDSLYLSRNITLDW 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03856 211 Coils Coil 166 190 - -
Viun7g03856 211 Gene3D Glycolipid transfer protein 6 211 IPR036497 -
Viun7g03856 211 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 11 201 IPR014830 GO:0005737|GO:0120009|GO:0120013
Viun7g03856 211 SUPERFAMILY Glycolipid transfer protein, GLTP 29 210 IPR036497 -
Viun7g03856 211 Pfam Glycolipid transfer protein (GLTP) 37 175 IPR014830 GO:0005737|GO:0120009|GO:0120013
Viun7g03856 211 FunFam Accelerated cell death 11 5 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03856 Viun-Chr7 38698352 38701669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03856 10 211 Acyl Lipid Metabolism Gene Families AT4G39670 65.049 2.11e-98 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03856 - - gmx:100818548 357.836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03856 7 38698352 38701669 Viun7g03856 7 38698352 38701669 ECH