Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03742 ATGTTACGGCTCACCATGGGATTGGTAACCACCACGGTTCCCGCGAACGTCGTTCCTCAGTTCGGGTCGGTCCGAGCATCTATTCGGGTCGGAAACCCATCCGGGTTGAACTTCCCTCTCTCACTGTCACAGAAGAGGAATAGGAGCTATGTTTGCTTGGCTGTGGATGACGACCTCAGACAGGAGCAGCAGGACTTGAGTACAACCGGTATTGGGTTGGGCTCTGCCCTTGAAGAAAGGCCCGAAAACACAGATCTTTTTGAGAGTACATCAGAAGAAGTGCAGGGAAATTTTGAGCAAGATGGTGAACGAAGTGCTATCTATGATTTTCTTTATCCTAGTAAAGAGCTTCTTCCTGATGATAAAGAAATGAGTGTATTTGATCATCTTGAAGAGCTGCGACAGAGAATCTTTGTATCAGTTTTAGCTGTTGGAGCTAGCATTATGGGATGCTTTGCATTTTCAAAAGAATTGATAATGATTCTTGAAGCTCCTGTTAAATCACAGGGTGTAAGATTTCTTCAGCTGGCTCCTGGTGAATTTTTCTTTACATCTTTAAAGGTATCTGGGTACTGTGGCCTTCTTTTGGGAAGCCCCATCATCCTCTATGAAATCATAGCCTTTATACTTCCAGGACTTACAAAATCCGAAAGAAGATTTCTAGGGCCAATTGTTTTAGGCTCATCAGTTCTTTTCTATGCTGGAATAACTTTCTCCTACTTAGTTCTGACACCTGCGGCTTTAAATTTCTTTGTTAACTACGCTGAAGGTGCTGTTGAATCATTATGGTCCATTGATCAGTACTTTGAATTTGTTCTTGTGCTTATGTTCAGTACAGGCTTATCTTTCCAGGTACCTGTCATACAATTTCTACTGGGACAACTTGGACTGGTGTCCGGGGACCAGATGCTATCCATTTGGAGGTATGTTGTGGTTGGTGCAGTAGTGGCAGCTGCTATAGTTACGCCATCTACCGATCCTCTTACTCAAGTTCTTCTAGCAGCACCTTTATTGGGTCTTTACCTTGGTGGCGCATGGATGGTCAAGCTTACTGGACGATGA 1062 0.4388 MLRLTMGLVTTTVPANVVPQFGSVRASIRVGNPSGLNFPLSLSQKRNRSYVCLAVDDDLRQEQQDLSTTGIGLGSALEERPENTDLFESTSEEVQGNFEQDGERSAIYDFLYPSKELLPDDKEMSVFDHLEELRQRIFVSVLAVGASIMGCFAFSKELIMILEAPVKSQGVRFLQLAPGEFFFTSLKVSGYCGLLLGSPIILYEIIAFILPGLTKSERRFLGPIVLGSSVLFYAGITFSYLVLTPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVSGDQMLSIWRYVVVGAVVAAAIVTPSTDPLTQVLLAAPLLGLYLGGAWMVKLTGR 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03742 353 NCBIfam twin-arginine translocase subunit TatC 127 341 IPR002033 GO:0016020
Viun7g03742 353 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 105 353 IPR002033 GO:0016020
Viun7g03742 353 Hamap Sec-independent protein translocase protein TatC [tatC]. 121 353 IPR002033 GO:0016020
Viun7g03742 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 125 152 IPR002033 GO:0016020
Viun7g03742 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 199 217 IPR002033 GO:0016020
Viun7g03742 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 217 243 IPR002033 GO:0016020
Viun7g03742 353 PRINTS Bacterial Sec-independent translocation TatC protein family signature 268 296 IPR002033 GO:0016020
Viun7g03742 353 ProSitePatterns TatC family signature. 268 287 IPR019820 -
Viun7g03742 353 Pfam Sec-independent protein translocase protein (TatC) 128 336 IPR002033 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03742 Viun-Chr7 37885037 37890352 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03742 K03118 - gmx:100801670 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03742 7 37885037 37890352 Viun7g03742 7 37885037 37890352 ECH