Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03665 ATGCAAATCCTCTACCTCGCCATCATTTCCCTCTCTCTCCTTCTCTTCCACAACACAAACACCTTCATCCTAGTCCAAGCCCTCACCTCGCCCTCAGACATTGCAGCCCTCAGAGCCTTCAAGGCCTCGATCAAACCCTCCTCCATCGCACCCTGGTCCTGCCTCGCCTCATGGAACTTCACCACCGATCCCTGCTCAATACCTCGCCGCACCAGCTTCATCTGCGGCCTCACCTGCACCGCTGATTCCAAAACTATCAACCAAATCACTCTCGACCCAGCAGGCTACTCCGGCACACTCACCCCCCTAATCTCTCAACTCACACAACTCACCACACTTGACCTCTCCGATAACAACTTCTTCGGCTCAATCCCCTCTTCAATCTCTTCCCTCTCCAACCTCCAAACCTTAACCCTCCGATCCAATTTCTTCTCAGCCTCAATTCCTCCCTCCATAACCACTCTCAAATCACTCCAATCTCTTGATTTTTCACACAATTCTCTTTCTGGGTATCTTCCAAACTCTATGAACTCCCTCGCCAAACTCCGTAGACTCGATCTCAGCTTCAACAATCTCACCGGTTCAATCCCCAAACTCCCACCCAACTTGCTCGAACTCGCGATCAAGGCCAATTCTCTATCTGGGCCTCTCCAAAAACAGAACTTTCAAGGGATGAACCAGTTAGAAGTGGTGGAGCTAAGCGATAATGCCCTCACCGGAACGGTGGAATCCTGGTTCTTCTCTTTACCGTCGCTGCAGCAGGTAAACTTGGCCAACAACACCTTCACGGCGACGCAGATCTCGGGACCACGCCCGGCCCCCAGCAGCGGCAACCTCGTTGCCCTCGACCTTGGGTTTAACAGAATCCAAGGCTACGCTCCCGCGAATCTCGCCTCGTTTCCCGCGCTGTCGTTCCTGTCGCTTCGCTACAACGCGCTACGTGGCGCGATCCCTGTGGAGTACGGGCAAATGAAGTCCATAAGGAGGCTCTTCCTCGACGGAAACTTCCTCCTCGGAAAGCCGCCGGCTGGGCTTGTCGCCGGCGGCACGGAGGTCACCGGAAGTCTGGGGGACAATTGTCTGAAGGAGTGTCCAAGGTCATCGCAGCTGTGCTCGCCGGCACAGAAACCAATCTCAGTTTGCAAGCGAGCCTACAGTGGTAGACCAACACCGATACCTGTTGTCGGTTAA 1191 0.5432 MQILYLAIISLSLLLFHNTNTFILVQALTSPSDIAALRAFKASIKPSSIAPWSCLASWNFTTDPCSIPRRTSFICGLTCTADSKTINQITLDPAGYSGTLTPLISQLTQLTTLDLSDNNFFGSIPSSISSLSNLQTLTLRSNFFSASIPPSITTLKSLQSLDFSHNSLSGYLPNSMNSLAKLRRLDLSFNNLTGSIPKLPPNLLELAIKANSLSGPLQKQNFQGMNQLEVVELSDNALTGTVESWFFSLPSLQQVNLANNTFTATQISGPRPAPSSGNLVALDLGFNRIQGYAPANLASFPALSFLSLRYNALRGAIPVEYGQMKSIRRLFLDGNFLLGKPPAGLVAGGTEVTGSLGDNCLKECPRSSQLCSPAQKPISVCKRAYSGRPTPIPVVG 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03665 396 PRINTS Leucine-rich repeat signature 179 192 - -
Viun7g03665 396 PRINTS Leucine-rich repeat signature 158 171 - -
Viun7g03665 396 SUPERFAMILY L domain-like 30 342 - -
Viun7g03665 396 FunFam Nuclear pore complex protein NUP107 30 198 - -
Viun7g03665 396 Gene3D Ribonuclease Inhibitor 200 365 IPR032675 -
Viun7g03665 396 ProSiteProfiles Leucine-rich repeat profile. 181 203 IPR001611 GO:0005515
Viun7g03665 396 Gene3D Ribonuclease Inhibitor 31 199 IPR032675 -
Viun7g03665 396 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 11 198 - -
Viun7g03665 396 Pfam Leucine rich repeat 201 260 IPR001611 GO:0005515
Viun7g03665 396 Pfam Leucine rich repeat 132 192 IPR001611 GO:0005515
Viun7g03665 396 Pfam Leucine rich repeat 278 335 IPR001611 GO:0005515
Viun7g03665 396 Pfam Leucine rich repeat N-terminal domain 31 66 IPR013210 -
Viun7g03665 396 Pfam Leucine Rich Repeat 109 131 IPR001611 GO:0005515
Viun7g03665 396 SMART LRR_typ_2 155 178 IPR003591 -
Viun7g03665 396 SMART LRR_typ_2 107 131 IPR003591 -
Viun7g03665 396 SMART LRR_typ_2 249 272 IPR003591 -
Viun7g03665 396 SMART LRR_typ_2 179 206 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03665 Viun-Chr7 37570163 37571960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03665 133 362 Receptor kinase-like Gene Family AT1G73080 27.826 1.69e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03665 - - gmx:100801713 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03665 7 37570163 37571960 Viun7g03665 7 37570163 37571960 ECH