Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03620 ATGGGAAAGACTTCTTACGGTATATTATGGAATATTTCGCAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGATGCTCACGTTTCCGGAAGCTGAACTTAATGGGGGAGTTCATGCATATGCATACCCTAAATCTGGATTTCAGTTCTTCCCTTACCAGTTTCCAGGAGGAATGTTTCAATTGTATGCCTAATCTAATGCGCCTGTCAATGTGTGATACAAGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTAATTGAATTAAGGTTTCAATATTGGCAGTATTGCAATGATTCTGGGATATCTTTTACCTCATGTAGTGGGAAGTCTGATGACACTGCTGATTTTAGCCTGCTTGATAGAATTCCTTTTATTGTTGAACCCTTCACCAATACAACTGAACTGGCAGATCCCAACATTAGTGCTGAAGACCCACTAAGGAATTTTTATTCCTTGGATGAAGAAGTTGTAAATCATGATGTTCAAAGCATGGCTGAGGATTCGTCAGATGACAGTGAAGTTGACTTTACTAGTCATCATCATAGATACTGGTTGTCAGATGTTTTTCCTGGGTGGAGTTCTGAAGTGCCTCTTCTTTATGAGAATGAAGAGGAAGAAGATTCATCTCAAGGCACTTTTGTGGAGCCTATTACTGATGTTTCTATGAAGTATATGTCTCGTCATGCATCACCAATATGCTATGAGAAGCATTACAGAGAGTTCATGATTGCTTCATTGCCAAATCTGAAAAGTTTAGATAATATGCGTATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCATATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTACAGAAAAGAGAAATAAAATCAGGTCAGAGTAAGGTGCACTCTTCCAAGAATAGGACATCATATCCTTCTAGACAATCGCAATATTTTTATGCTAGGTCTCTCTCTGCTGCTAAATTGGGATCCTCAACTTGGCCTTTCTTGCATCCCCTTTCTCTATTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGGCAGTTTGAGTACCATCCATCTGACTCCAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATCAACCATGAGAATGAACATATTGTTAGTTATATTCCATCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGATCAGACAATGGTTCCTTGAAATTGTATGACATCCACCACATACCAAGAAAAGTTACTGGCATACATGGGAATTTTGGCTGTGTTACGTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTACGGATGAACTGTTTCTTGCGAGTGGTTACTCAAGAAATGTTGCTTTATATGACATCAACAGTGGGAAACGCTTACAAGTGTTCACAGATATGCATCGTGGACATATTAATGTAGTCAAGTTTGCTAATCATTCCCCATCAATTTTTGCAACTTCATCGTTTGATCACGATGTGAAGATGTGGGACTTGAGACAGAAACCAATACACCCCTGCTTTACAGTTTCAAGCTCCAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCTTCAGCTGTTGATAATGAGGTTAGACAATATCTGGCTATTGATGGTAGGCTTCACTTGGTTTTCGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATCATAAGTGGGAGTTGTGATGAGCACGTTCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTTGAGGGAAGAAACTTAGGAAGTTCCGTGTTTGTTCAGTCTTTGAGGGGTGATCCTTTCCGGGATTTCAATTTGAGCGTGTTAGCAGCTTACATGCGGCCAGGCTCCAAGTCTAAAATTGTCAAGATCAACTTACTAGCATCTAGTGGCCATACCAACAAGGATGATTCTGATAATCCGCACCCTTGCCCATTTCACAGCATGGGAGCTTGA 2091 0.3989 MGKTSYGILWNISQRGLACQVLTLRCSRFRKLNLMGEFMHMHTLNLDFSSSLTSFQEECFNCMPNLMRLSMCDTRITNLWTTVAALSKLPSLIELRFQYWQYCNDSGISFTSCSGKSDDTADFSLLDRIPFIVEPFTNTTELADPNISAEDPLRNFYSLDEEVVNHDVQSMAEDSSDDSEVDFTSHHHRYWLSDVFPGWSSEVPLLYENEEEEDSSQGTFVEPITDVSMKYMSRHASPICYEKHYREFMIASLPNLKSLDNMRIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSGQSKVHSSKNRTSYPSRQSQYFYARSLSAAKLGSSTWPFLHPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHHIPRKVTGIHGNFGCVTFDEFDQLTSVHVNSTDELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQYLAIDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVRICCAQTGRRLRDISLEGRNLGSSVFVQSLRGDPFRDFNLSVLAAYMRPGSKSKIVKINLLASSGHTNKDDSDNPHPCPFHSMGA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03620 696 MobiDBLite consensus disorder prediction 677 696 - -
Viun7g03620 696 SMART WD40_4 485 526 IPR001680 GO:0005515
Viun7g03620 696 SMART WD40_4 531 569 IPR001680 GO:0005515
Viun7g03620 696 SMART WD40_4 389 431 IPR001680 GO:0005515
Viun7g03620 696 SMART WD40_4 447 482 IPR001680 GO:0005515
Viun7g03620 696 SUPERFAMILY L domain-like 20 111 - -
Viun7g03620 696 PANTHER BNAC09G30780D PROTEIN 8 695 IPR046377 GO:0071493|GO:0080008
Viun7g03620 696 SUPERFAMILY WD40 repeat-like 359 625 IPR036322 GO:0005515
Viun7g03620 696 Gene3D Ribonuclease Inhibitor 17 275 IPR032675 -
Viun7g03620 696 SMART LRRcap_2 242 260 IPR003603 -
Viun7g03620 696 Gene3D - 359 644 IPR015943 GO:0005515
Viun7g03620 696 Pfam WD domain, G-beta repeat 497 526 IPR001680 GO:0005515
Viun7g03620 696 ProSiteProfiles Trp-Asp (WD) repeats profile. 493 528 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03620 Viun-Chr7 37304156 37311254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03620 412 612 Miscellaneous Gene Families AT5G08390 23.267 5.03e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03620 - - gmx:100806443 1285.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03620 7 37304156 37311254 Viun7g03620 7 37304156 37311254 ECH