Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03558 ATGTTGCAAACCCTAGGAGGCGTAACCCTTCGCTTCGTGAATCGGTCATGGCTCCGAAACCTGACGGTGCGTGCAATGACATTCTCTTCCTCTTCCGAGTATGGAGACCAGTCACGGGGTGGCCTTCCTCGCTTCTACTCCGAAATTCTTCCTCCTTCCAAGGGTAGTGTTATACGCGTGCAAGGTGATGAATTCTGGCATATGACAAAAGTACTGAGGTTGAGCACCAACGATAGGGTACAGCTGTTCAATGGAAAAGGAGGTCTGGTAGAAGGATGCATACAGGACATGGACCGCAGTGGGCTTGATTTTGTTGCATCGAGTGATTTGATATCAATACCTCCACAAAATACACAATTGCACGTATTTGCTGGTTTTGGTACTCTAAAGGGTGGGCGTGCTGACTGGCTTGTAGAAAAATGCACTGAACTTGGAGCCAGTAGTGTAACTCCTCTATTGACTGAACGTTCTCCATCGATCTCAGAAAATCGGGTGGACAGATTGGAACGTGTCATTTTAGCAGCATCCAAACAATGTCAACGACTGCATGAAATGGTTCTGAAAGATCCTATAGAGATTGATGACCTTTTGCACCTTATTGCACAATCAAAGCTAGCTCTTGTTGCGACGGCGAAAGCAACTCCTGTTCTTAGTGCATTGACATCATTGGAAAAGAAAACCAGTGGCTTAATAATTATTGGACCAGAAGGCGATTTCACCGAGAAAGAAGCGAGTATGATGATGGAAGCAGGTGCTACAGCTGTTAGTCTTGGACCTCATCGTCTTCGGGTTGAAACTGCCACTATATCACTTTTGGCAACTGTCATGTTATGGTCTGACTCACTGCAAACTTCGGTCAGTTGA 864 0.4583 MLQTLGGVTLRFVNRSWLRNLTVRAMTFSSSSEYGDQSRGGLPRFYSEILPPSKGSVIRVQGDEFWHMTKVLRLSTNDRVQLFNGKGGLVEGCIQDMDRSGLDFVASSDLISIPPQNTQLHVFAGFGTLKGGRADWLVEKCTELGASSVTPLLTERSPSISENRVDRLERVILAASKQCQRLHEMVLKDPIEIDDLLHLIAQSKLALVATAKATPVLSALTSLEKKTSGLIIIGPEGDFTEKEASMMMEAGATAVSLGPHRLRVETATISLLATVMLWSDSLQTSVS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03558 287 PANTHER RIBOSOMAL RNA SMALL SUBUNIT METHYLTRANSFERASE E 41 284 IPR006700 GO:0006364|GO:0008168
Viun7g03558 287 Gene3D - 41 285 IPR029026 -
Viun7g03558 287 SUPERFAMILY PUA domain-like 43 102 IPR015947 -
Viun7g03558 287 SUPERFAMILY alpha/beta knot 118 279 IPR029028 -
Viun7g03558 287 Pfam RNA methyltransferase PUA domain 61 104 IPR046887 -
Viun7g03558 287 Pfam RNA methyltransferase domain 118 275 IPR046886 -
Viun7g03558 287 FunFam uncharacterized protein LOC106771328 isoform X2 41 286 - -
Viun7g03558 287 CDD RsmE-like 120 273 IPR046886 -
Viun7g03558 287 NCBIfam RsmE family RNA methyltransferase 57 276 IPR006700 GO:0006364|GO:0008168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03558 K09761 - gmx:100777253 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03558 7 36968625 36972039 Viun7g03558 7 36968625 36972039 ECH