Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03547 ATGGTTTTGAAGTCAATAGTTGCATCAGCGAGCGATCTAAGTGTAGTGAGTGTTGCTGGGAGCGCTCCGCTTGAATTCAAGAATCGGGGTTTTGGCGGCCGAGTCATCAGCCTCGGATTTCGTTTTAACAGAGGGAGATGGAAGGGGAGTGAAAGGTTTAACTTTAAGGTTCGTGCTGCTGTGGATGTGGGAGTGGAGCGTTCAAAGAGCGAGGCTTTGAAGGGTAATTCTGGACTGGACGTGGTTTCAGAGGGAGAGTTAACGGTAAAGGGGTTTGCGGGGTTGCGGAAGACCAAGCTCGTCTGCACAATTGGTCCTGCTTGCAGCTCTTTGGAGGAACTTGAGAATTTGGCCTCAGGAGGCATGAATGTTGCCAGGCTCAACATGTGTCATGGCACCAGGGAGTGGCACCGTGATGTGATTAGGAAGATCAAGAAGTTAAATGAGGAGAAAGGGTTCTGTGTTTCTGTGATGATTGACACTGAAGGTAGTCAGATTCATTTTGTTGACCATGGAGCCTCATCCTCGGTTAAAGTAGAGGAAGGTTCAATTTGGCATTTTACTGCTGAGCATTTTGAGGGTTCTCGCCCATTCACAGTACAGACAAACTACACAGGTTTTTCTGAAGATATTGAAGTGGGTGATGAACTTGTTATTGATGGTGGAATGGCTTGCTTTGAAGTCATTGAAAGGAAAGGAAATGATTTGCATTGTAAGTGCATCGATGCTGGTCTTTTCCTTCCTGGAGCCAAATTTAGTTTCTGGAGAGATGGAAAGCTTGTGAGGAGGAATTACAAGCTCCCCACTCTATCAACAAAGGATTGGGCTGACATTGACTTCGGTATAGCTGAGGGTGTTGACTTTTTTGCCTTATCCTTTGTCAATCACGCTGATTCTGTTAAGGATCTAAAGAACTATCTCTCCACGAAGTCAACCAAATCCATTAAAGTTTTGTCGAAGATAGAAAGCTTAGAATCTCTTCATAAACTTGAGGAAATAGTGCGAGCTTCTGATGGAATCATGGTGGCTCGGGGTGATCTTGGGGTCGAAATACCACTTGAACAGATTCCTACAGTCCAAGAGGATATAATTTACGTATGCAGACAACTAAACAAGCCAGTGATTGTAGCTTCTCAGCTTCTTGAGTCAATGGTCGAGTATCCAACCCCAACTCGTGCTGAGGTAGCAGATGTTTCTGAAGCAGTTCGACAGTATGCTGATGCTTTGATGTTGTCTGGTGAATCAGCTATTGGGTCATATGGGCGTAAAGCTTTGGCAGTCTTGGATATGACTAGCAGTAGAATGGAATCATGGAATCGGGAAGAGAACAGACAGAATCTTCTCAATCACCACCAACTTGGAGCAGAATTGCCAGAATGCATCACTGAGCAAATATGCAATTGTGCTGTTGAAATGGCCAACAACCTTGGTGTGGATGCCATCTTTGTGTACACAAAGCATGGACACATGGCATCACTTCTATCACGCAACCGCCCAAATCCTCCCATCTTTGCCTTCACCGACGATAAAAGTACCCGCATGGCTCTGAATCTGCAATGGGGGGTTGTGCCCCTTCTGCTTGATTTATCAGATGATGCCGAATCTAACATCTCAAAGTCAGTCCAACTTATGGAATCCAAAGGATTGATCAGACAAGGAGATGTTGTTCTAGTGGTATCGGATATTGCTCACACACGTTCCTCTCCTATGGCTCTCCAATCAATTCAGGTGAAGACTATTCCCTAA 1746 0.4507 MVLKSIVASASDLSVVSVAGSAPLEFKNRGFGGRVISLGFRFNRGRWKGSERFNFKVRAAVDVGVERSKSEALKGNSGLDVVSEGELTVKGFAGLRKTKLVCTIGPACSSLEELENLASGGMNVARLNMCHGTREWHRDVIRKIKKLNEEKGFCVSVMIDTEGSQIHFVDHGASSSVKVEEGSIWHFTAEHFEGSRPFTVQTNYTGFSEDIEVGDELVIDGGMACFEVIERKGNDLHCKCIDAGLFLPGAKFSFWRDGKLVRRNYKLPTLSTKDWADIDFGIAEGVDFFALSFVNHADSVKDLKNYLSTKSTKSIKVLSKIESLESLHKLEEIVRASDGIMVARGDLGVEIPLEQIPTVQEDIIYVCRQLNKPVIVASQLLESMVEYPTPTRAEVADVSEAVRQYADALMLSGESAIGSYGRKALAVLDMTSSRMESWNREENRQNLLNHHQLGAELPECITEQICNCAVEMANNLGVDAIFVYTKHGHMASLLSRNRPNPPIFAFTDDKSTRMALNLQWGVVPLLLDLSDDAESNISKSVQLMESKGLIRQGDVVLVVSDIAHTRSSPMALQSIQVKTIP 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03547 581 PRINTS Pyruvate kinase family signature 344 368 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 PRINTS Pyruvate kinase family signature 394 412 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 PRINTS Pyruvate kinase family signature 413 429 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 PRINTS Pyruvate kinase family signature 153 169 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 PRINTS Pyruvate kinase family signature 286 300 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 PRINTS Pyruvate kinase family signature 369 393 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 PRINTS Pyruvate kinase family signature 317 343 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 90 438 IPR015813 GO:0003824
Viun7g03547 581 NCBIfam pyruvate kinase 96 566 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 Pfam Pyruvate kinase, alpha/beta domain 463 563 IPR015795 -
Viun7g03547 581 FunFam Pyruvate kinase 431 571 - -
Viun7g03547 581 Gene3D - 436 562 IPR036918 -
Viun7g03547 581 FunFam Pyruvate kinase 269 435 - -
Viun7g03547 581 Pfam Pyruvate kinase, barrel domain 96 437 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 Gene3D - 164 268 IPR015806 GO:0004743|GO:0006096
Viun7g03547 581 SUPERFAMILY PK C-terminal domain-like 457 563 IPR036918 -
Viun7g03547 581 ProSitePatterns Pyruvate kinase active site signature. 315 327 IPR018209 GO:0004743|GO:0006096
Viun7g03547 581 PANTHER PYRUVATE KINASE 74 561 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Viun7g03547 581 FunFam Pyruvate kinase 164 268 - -
Viun7g03547 581 SUPERFAMILY PK beta-barrel domain-like 171 249 IPR011037 -
Viun7g03547 581 Gene3D - 96 435 IPR040442 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03547 Viun-Chr7 36905444 36909652 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03547 K00873 - gmx:100780644 1027.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03547 7 36905444 36909652 Viun7g03547 7 36905444 36909652 ECH