Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03345 ATGAGGAGAGCTGGCTTCCACAGGCAGCATGGGAGGCACGCTGGAGGCTCAGGAATGAAAGGAATGATTGTGAAGTTATCTCTTGCTGCTGTAGTGCTCTTGATCTGCACGCTCTCCTTGTTTTTCTCCTCAACAGGAACTTCGAATGTTCAATCCAGCTATCGCTCCGAGATCCATGTAGAAGAGCTATGGAGCAACGCTGATTCTGGCGGTTGGCGGCCATCGTCTGCTCCGCGAACTCATTGGCCTCCTCCTCCGAATGAGAGCAATGGCTACTTGCGCGTTCGATGTAACGGTGGACTGAATCAACAGCGTAGTGCGATCTCTAATGCTGTTCTTGCTGCACGGATCATGAATGCTACGCTAGTGCTACCCGAGTTGGATGCAAACTCTTTTTGGCATGACGACAGTGGTTTCTATGGTATTTATGATGTTGAGCATTTCATCAAAACACTGAGGTATGATGTTAAAATTGTGGAAAGCATTCCAGAAAATCAGAAAAATGGCAAAAAAAAGAAAATAAAGGCTTTTCAGATTCGTCCTCCTAGAGATGCTCCTATAAGTTGGTATACTAATGATGCTTTGAAGAAGATGAAGGAACATGGGGCAATCTATCTTACTCCCTTTTCACATCGCTTGGCTGAAGAAATTGACAATCCTGAGTACCAAAGGTTGAGGTGTAGAGTCAACTATCATGCTTTAAGATTCAAGCCACATATCATGAAGCTAAGTCAATCAATTGTTGACAAGCTTCGAACTCAAGGTCCCTTTATGTCTATACATCTTCGGTTTGAGATGGACATGTTAGCATTTGCTGGATGCTTTGATATATTTACACCCCAGGAGCAAAAGATTTTGAAAAAGTATCGACAAGAAAATTTTGCACCTAAAAGACTTGTCTATAATGAAAGAAGGGCTATTGGGAAATGCCCGTTGACTCCTGAGGAGGTTGGTCTTATTCTGCGCGCATTGGGTTTTGACAATTCGACTAGGATATATCTTGCAGCGGGTGAATTGTTTGGAGGGGAACGATTTATGAAACCATTTCGAAGTTTGTTCCCTCGACTTGAGAATCATTCTTCTGTGGAACACTCTGAAGAGCTGGCTGAAAACACTAGGGGATTGGCAGGTTCTGCTGTGGATTACATGGTCTGTCTTCTTTCTGACATTTTCATGCCAACTTATGATGGCCCTAGCAATTTTGCCAACAATCTGCTCGGACATCGTCTATATTATGGCTTCCGTACGACAATCCGACCTGATAGAAAATCTCTTGCCCCAATCTTCACCGATAGGGAGAATGGGCGGACAGCTGGTTTTGATGAAGCTGTTAGGAAAGTCATGCTCAGAACAAACTTTGGAGAACCTCATAAGCGTGTTTCTCCAGAGTCTTTCTATACTAATTCTTGGCCTGAATGCTTCTGCCAAACATCTGCAAAGAACCCTGCAGACAAATGTCCCCCAAATGACATTTTAAATATTATGAATGACGAATTAGAGAAAACAGAGACACACGCTAATTCTACCATACACAGCATCGGTGTCTCTCTTGCTCTCAGAAAACAACTCAGAACAATATTTCCTTCACACCCATCAATGGCTTTCTCTTCTAAACTTGACAACTTCATCCTCTCTGCCTACAAATCGCAAAACTCCACTGCCCCACTTTCAAAAATTCAACCTTCCTCATTTCTCCCATGTCCTTCTTCCTTGAAGCCTCAAAAGCTTCCCTTCAGAGTTCGCTACGATTCAACCATCCGAGCCACGTCAGCACCCTCATCCCCTTCCACAGCCATTGCCGAACCTGAAGGCATTAAGATTAACTCGATTCCAACCAAACCCTTTGAGGGGCAAAAGACTGGTACTAGTGGGCTTCGGAAGAAGGTGAAAGTGTTTATGCAAGAAAATTACCTTGCAAATTGGATCCAGGCCCTGTTTAACTCATTGCCTCCGGAGGATTACAAGAGTGGTTTGTTAGTGTTGGGAGGTGATGGTCGATACTTTAACCGGGAAGCTGCACAGATCATAATCAAAATTGCTGCTGGAAATGGTGTTGGAAAAATTCTGGTTGGAAAGGAAGGTGTTTTGTCAACACCAGCTGTTTCTGCAGTAATAAGAAAGCAAAAGGCAAATGGTGGATTTATTATGAGTGCAAGCCATAATCCCGGTGGTCCTGAATATGATTGGGGTATTAAGTTTAATTACAGCAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTATGGAAACACGCTGTCGATCTCTGAGATAAAGATCGCTGATGTTCCTGATGTTGACTTATCCAAAGTTGGGGTTACGAAGTTTGGAAGCTTCAGTGTGGAAGTAATAGACCCAGTCTCTGACTATCTGGAGCTACTGGAGACAGTATTTGATTTTCAGCTAATCAAAGGACTTCTTTCACGTCCAGATTTTAGGTTTATATTTGATGCCATGCATGCAGTTACTGGTGCTTATGCTAAACCCATCTTCGTTGATAAACTTGGTGCAACTCTGGATTCAATTTCAAATGGAATTCCTTTGGAAGATTTTGGACACGGCCATCCTGATCCTAATCTAACATATGCAAAGGACCTTGTAAACATTCTGTACGCTGAAAATGGACCTGATTTTGGAGCTGCCAGTGATGGGGATGGTGATAGAAATATGATTCTGGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCCGTAGCAGTTATTGCAGCCAATACAGAAGCAATTCCATACTTCAAGAATGGCGTGAAGGGTCTTGCTCGATCAATGCCGACAAGTGGTGCTCTTGATCGTGTTGCTGAAAAACTGAACCTCCCTTTCTTCGAGGTCCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAGTTTGCGGGGAAGAGAGTTTTGGAACAGGGTCTGACCACATTCGTGAGAAAGATGGCATCTGGGCTGTCTTAGCTTGGCTTTCTATTATTGCACATCGTAACAAAGACAAGAAGCCAGGGGAGAAATTGGTCTCTGTATCCGACGTCGTGAAGGAGCACTGGGCAACTTATGGAAGGAATTTCTTCTCTAGATATGACTACGAGGAATGTGAATCTGAAGGTGCCAATAAGATGATAGAATACCTACGAGATATTATAGCCAAGAGCAAGGCCGGTGATAAGTATGGAAGTTATGTCCTTCAGTTTGCAGATGATTTTACATACACCGATCCTGTAGACGGAAGTGTGGTATCAAAACAAGGCGTTCGGTTTGTTTTTACAGATGGCTCAAGGATTATATATCGTTTATCGGGAACTGGTTCTGCAGGAGCAACTGTTAGAGTATACATCGAACAGTTTGAACCAGATGTTTCTAAACATGATGCTGATGCTCAAATTGCCTTAAAACCATTAATAGATTTGGCAATATCCGTGTCAAAGCTCAAAGACTACACAGGGAGGGAGCAACCTACTGTGATCACATAA 3483 0.4312 MRRAGFHRQHGRHAGGSGMKGMIVKLSLAAVVLLICTLSLFFSSTGTSNVQSSYRSEIHVEELWSNADSGGWRPSSAPRTHWPPPPNESNGYLRVRCNGGLNQQRSAISNAVLAARIMNATLVLPELDANSFWHDDSGFYGIYDVEHFIKTLRYDVKIVESIPENQKNGKKKKIKAFQIRPPRDAPISWYTNDALKKMKEHGAIYLTPFSHRLAEEIDNPEYQRLRCRVNYHALRFKPHIMKLSQSIVDKLRTQGPFMSIHLRFEMDMLAFAGCFDIFTPQEQKILKKYRQENFAPKRLVYNERRAIGKCPLTPEEVGLILRALGFDNSTRIYLAAGELFGGERFMKPFRSLFPRLENHSSVEHSEELAENTRGLAGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKSLAPIFTDRENGRTAGFDEAVRKVMLRTNFGEPHKRVSPESFYTNSWPECFCQTSAKNPADKCPPNDILNIMNDELEKTETHANSTIHSIGVSLALRKQLRTIFPSHPSMAFSSKLDNFILSAYKSQNSTAPLSKIQPSSFLPCPSSLKPQKLPFRVRYDSTIRATSAPSSPSTAIAEPEGIKINSIPTKPFEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKSGLLVLGGDGRYFNREAAQIIIKIAAGNGVGKILVGKEGVLSTPAVSAVIRKQKANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADVPDVDLSKVGVTKFGSFSVEVIDPVSDYLELLETVFDFQLIKGLLSRPDFRFIFDAMHAVTGAYAKPIFVDKLGATLDSISNGIPLEDFGHGHPDPNLTYAKDLVNILYAENGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANTEAIPYFKNGVKGLARSMPTSGALDRVAEKLNLPFFEVPTGWKFFGNLMDAGNLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDKKPGEKLVSVSDVVKEHWATYGRNFFSRYDYEECESEGANKMIEYLRDIIAKSKAGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDADAQIALKPLIDLAISVSKLKDYTGREQPTVIT 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03345 1160 Gene3D - 795 897 - -
Viun7g03345 1160 SUPERFAMILY Phosphoglucomutase, first 3 domains 789 898 IPR016055 GO:0005975|GO:0016868
Viun7g03345 1160 CDD PGM1 610 1160 - -
Viun7g03345 1160 PRINTS Phosphoglucomutase/phosphomannomutase family signature 848 861 IPR005841 GO:0005975|GO:0016868
Viun7g03345 1160 PRINTS Phosphoglucomutase/phosphomannomutase family signature 877 892 IPR005841 GO:0005975|GO:0016868
Viun7g03345 1160 PRINTS Phosphoglucomutase/phosphomannomutase family signature 712 726 IPR005841 GO:0005975|GO:0016868
Viun7g03345 1160 PRINTS Phosphoglucomutase/phosphomannomutase family signature 812 831 IPR005841 GO:0005975|GO:0016868
Viun7g03345 1160 FunFam Phosphoglucomutase 5 606 794 - -
Viun7g03345 1160 FunFam Phosphoglucomutase 5 795 897 - -
Viun7g03345 1160 Gene3D - 898 995 - -
Viun7g03345 1160 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 605 1160 IPR045244 GO:0004614|GO:0005975
Viun7g03345 1160 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 618 757 IPR005844 GO:0005975|GO:0016868
Viun7g03345 1160 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 790 893 IPR005845 GO:0005975
Viun7g03345 1160 Pfam GDP-fucose protein O-fucosyltransferase 92 412 IPR019378 -
Viun7g03345 1160 FunFam Phosphoglucomutase 5 1006 1160 - -
Viun7g03345 1160 Gene3D - 606 794 - -
Viun7g03345 1160 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 1083 1135 IPR005843 GO:0016868|GO:0071704
Viun7g03345 1160 SUPERFAMILY Phosphoglucomutase, first 3 domains 607 819 IPR016055 GO:0005975|GO:0016868
Viun7g03345 1160 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 713 722 IPR016066 GO:0000287
Viun7g03345 1160 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 901 1023 IPR005846 GO:0005975|GO:0016868
Viun7g03345 1160 CDD O-FucT_plant 92 417 IPR024709 -
Viun7g03345 1160 FunFam Phosphoglucomutase, cytoplasmic 1 898 995 - -
Viun7g03345 1160 SUPERFAMILY Phosphoglucomutase, C-terminal domain 1025 1160 IPR036900 GO:0016868|GO:0071704
Viun7g03345 1160 Gene3D - 1006 1160 - -
Viun7g03345 1160 SUPERFAMILY Phosphoglucomutase, first 3 domains 885 1030 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03345 Viun-Chr7 35339725 35354776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03345 61 476 Miscellaneous Gene Families AT1G22460 37.671 1.14e-80 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03345 K01835 - gmx:100802730 1169.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03345 7 35339725 35354776 Viun7g03345 7 35339725 35354776 ECH