Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03341 ATGGCCAACGTTACCTCCTCAGGTAAATCAAACGATCTCACAAATGAAAACGGTAAGGGAAACGGTGGACTCGTTGTTTGCTTTGGTGAAATGTTAATAGATTTTGTGCCAACAGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCCAGAAAGCTGCTGGTGGTGCACCTGCCAATGTGGCTGTTGGCATCGCTAGGCTTGGTGGTTCATCTGCTTTTGTAGGCAAGGTTGGAGCAGATGAATTTGGGTATATGTTGGTTGATATTTTAAAGCAGAACAATGTTGACACATCTGGCATAAAGTTTGACCCTAATGCAAGAACTGCTTTAGCTTTTGTTACACTTAGAGCTGATGGCGAGCGTGAGTTTTTGTTTTTCCGAAATCCTAGTGCTGATATGCTTCTTCAAGAGTCAGAGCTTGCTACCGATCTCATAAAGAAGGCTAAAATATTCCATTATGGTTCCATCAGCTTGATTCACGAACCATGCAAGTCAGCTCATCTTGCTGCTATGAAAATTGCTAAAGACTCTGGTTGCATTCTCTCATATGATCCAAATTTGAGATTGGCACTATGGCCCTCTGCTGAGGCTGCTCGGAATGGCATAAAGAGTATATGGGATCAAGCCGATGTCATAAAGATAAGTGAGGACGAGATAACATTTTTGACTTGTGGTGATGATCCTTACGATGATGATGTTGTGTTAAAGAAGCTTTTTCACCCTAATCTTAAGCTTTTAATCGTTACTGAAGGGTCAGGAGGTTGTAGATATTACACCCAGGAATTGAAGGGCAGGGTTGCAGGTGTCAAAGTTAATGCTGTTGACACAACTGGTGCTGGTGATGCATTTGTTAGTGGTATTATGTATAACTTAGCTTCTGACCAAAGTATTTTCCAGAATGAGGAACGTCTCCGAAAAGCTCTGTATTTTGCGAATGTATGTGGTGCCATCACAGTAACAGGGAGAGGGGCAATTCCTGCACTACCCACAAAAGAAGCTGTTCTGCAATTCGCTGAAACATAA 1026 0.4259 MANVTSSGKSNDLTNENGKGNGGLVVCFGEMLIDFVPTVGGVSLAEAPAFQKAAGGAPANVAVGIARLGGSSAFVGKVGADEFGYMLVDILKQNNVDTSGIKFDPNARTALAFVTLRADGEREFLFFRNPSADMLLQESELATDLIKKAKIFHYGSISLIHEPCKSAHLAAMKIAKDSGCILSYDPNLRLALWPSAEAARNGIKSIWDQADVIKISEDEITFLTCGDDPYDDDVVLKKLFHPNLKLLIVTEGSGGCRYYTQELKGRVAGVKVNAVDTTGAGDAFVSGIMYNLASDQSIFQNEERLRKALYFANVCGAITVTGRGAIPALPTKEAVLQFAET 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03341 341 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016301
Viun7g03341 341 CDD bac_FRK 24 326 - -
Viun7g03341 341 FunFam Probable fructokinase-2 22 341 - -
Viun7g03341 341 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016301
Viun7g03341 341 SUPERFAMILY Ribokinase-like 25 338 IPR029056 -
Viun7g03341 341 Pfam pfkB family carbohydrate kinase 24 331 IPR011611 -
Viun7g03341 341 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Viun7g03341 341 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Viun7g03341 341 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Viun7g03341 341 Gene3D - 23 341 IPR029056 -
Viun7g03341 341 PANTHER HEXOKINASE FAMILY MEMBER 24 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03341 Viun-Chr7 35314634 35317914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03341 K00847 - gmx:100818404 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun4g02313 4 38729578 38731526 Viun7g03341 7 35314634 35317914 ECH
Viun7g03341 7 35314634 35317914 Viun7g03341 7 35314634 35317914 ECH
Viun4g02313 4 38729578 38731526 Viun7g03341 7 35314634 35317914 PCT