Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03268 ATGAATTCAATAACCCTTTTAGGTCCAAAGATGGTCCACAAACTTTCCCATTCTTTGATTGTTTTGCGGAGTTTATGTAGCCATCCGTTTGGTGGTGATGGATTTGAATGCATTGAGGAGCCTCTGAAGAACCTAGGATTAGATTGTGATTCTGCTGTGGATGTAACGCTCCGTTTAAACGAGGATTTGGGTTATAACCAAAAGCAATTTTCACTGAGAAAAGGGTTCTTAGAAAGTGTGAGGTTAGATGCTAAGAGGGTTCTTGAGGTTCTCCGACAAGACGGTCCCGGTCTGGATGCGAGGTTGGTTTTAGGTGAGTTGCATGTAAGACCATCAGGGCTTCTCGTGAGGGAGGTCCTCTTTGGAATTTTGAAGAATATAAATTCTGAGAATAAAACTAGGTGGGCAAAGCTGGCATACAAGTTTTTTGTGTGGTGTAGTCAGCAAGAGGGTTACCGGCATACTGCGAATGCATATCACTTAGTTATGAACATATATGCGGAGTGTGAGGAGTTTAAGGCATTGTGGAGATTGGTTGATGAAATGATTGAGAAAGGGCTTCCGGCTACTGCTCGAACTTTCAATATCTTGATTCGTACTTGTGGTGAGGCAGGTTTGGCTAAGAAATTGGTGGAGAGGTTTATAAAATCAAAGACGTTTAACTTTAGGCCTTTTAAGCACTCCTACAATGCAATCCTATATTGTCTTCTTGTTTTAAACCAGTACAAGTTGATTGAGTGGGTTTATCAGCAGATGTTGCTTGATGGATTTTCTTCAGATATTTTAACTTATAATATTGTCATGTATGCCAAGTACAGACTTGGAAAGTTGGATCAATTTCACAGACTGTTTGATGAGATGGGTAGAAATGGATTTTCTCCAGATTTTCATACCTTCAATATTCTTCTTCACGTTCTTGGCAAAGGGGACAAACCGCTTGCAGCTCTCAATCTCTTAAATCACATGAGAGAAATGGGTATAGATCCAACTGTGCTTCACTTCACTACATTGATAGATGGACTCAGCAGAGCTGGAAATATGGATGCTTGCAAGTATTTTTTTGATGAAATGATAAAGAATGGATGTATCCCAGATGTGGTGGCTTACACTGTAATGATAACAGGATATGTAGTGGCTCATGAGCTTGAGAAAGCCCTGGAAATGTATCAAGATATGATTTCTAGAGAACAAGTTCCAAATGTTTTTACATACAATTCCATAATTCGGGGATTGTGCATGGCAGGAAAATTTGATGAAGCATGTTCAATGCTCAAGGAAATGGAAACCAAAGGTTGTAGTCCAAACTCTATTGTCTATGATACTTTAGTGAGTAGTTTAAGGAATGCTGGAAAGACTGCTGATGCTCATGAAGTGATCAGACAGATGACAGAGAAGAGGAAGTACACCCATATATATTCAAGATACGAACGGAAGAAATGA 1440 0.3958 MNSITLLGPKMVHKLSHSLIVLRSLCSHPFGGDGFECIEEPLKNLGLDCDSAVDVTLRLNEDLGYNQKQFSLRKGFLESVRLDAKRVLEVLRQDGPGLDARLVLGELHVRPSGLLVREVLFGILKNINSENKTRWAKLAYKFFVWCSQQEGYRHTANAYHLVMNIYAECEEFKALWRLVDEMIEKGLPATARTFNILIRTCGEAGLAKKLVERFIKSKTFNFRPFKHSYNAILYCLLVLNQYKLIEWVYQQMLLDGFSSDILTYNIVMYAKYRLGKLDQFHRLFDEMGRNGFSPDFHTFNILLHVLGKGDKPLAALNLLNHMREMGIDPTVLHFTTLIDGLSRAGNMDACKYFFDEMIKNGCIPDVVAYTVMITGYVVAHELEKALEMYQDMISREQVPNVFTYNSIIRGLCMAGKFDEACSMLKEMETKGCSPNSIVYDTLVSSLRNAGKTADAHEVIRQMTEKRKYTHIYSRYERKK 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03268 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 330 364 IPR002885 -
Viun7g03268 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 260 294 IPR002885 -
Viun7g03268 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Viun7g03268 479 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIAL 297 466 - -
Viun7g03268 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 295 329 IPR002885 -
Viun7g03268 479 Pfam PPR repeat 325 357 IPR002885 -
Viun7g03268 479 Pfam PPR repeat 430 463 IPR002885 -
Viun7g03268 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 155 189 IPR002885 -
Viun7g03268 479 Gene3D Tetratricopeptide repeat domain 115 237 IPR011990 GO:0005515
Viun7g03268 479 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Viun7g03268 479 Pfam PPR repeat family 364 412 IPR002885 -
Viun7g03268 479 Pfam PPR repeat family 260 306 IPR002885 -
Viun7g03268 479 Gene3D Tetratricopeptide repeat domain 241 324 IPR011990 GO:0005515
Viun7g03268 479 Gene3D Tetratricopeptide repeat domain 325 395 IPR011990 GO:0005515
Viun7g03268 479 Gene3D Tetratricopeptide repeat domain 396 467 IPR011990 GO:0005515
Viun7g03268 479 NCBIfam pentatricopeptide repeat 334 366 IPR002885 -
Viun7g03268 479 NCBIfam pentatricopeptide repeat 297 330 IPR002885 -
Viun7g03268 479 NCBIfam pentatricopeptide repeat 263 295 IPR002885 -
Viun7g03268 479 NCBIfam pentatricopeptide repeat 402 436 IPR002885 -
Viun7g03268 479 NCBIfam pentatricopeptide repeat 367 401 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03268 181 475 Miscellaneous Gene Families AT4G11690 28.716 1.08e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03268 - - gmx:100792512 863.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03268 7 34892854 34896412 Viun7g03268 7 34892854 34896412 ECH