Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03252 ATGGTTACACAGTTCGGCATCAAATTGGCCGTCCACCTCATCACCAATCACTTCGGCAATCTCGTCGCTAAAGTATGCGAAAATCTATTTAGTCATGGAGTCCTCACTTTGGATCAATTGGTTCGCTACTCGGAGCTTACTAAGGACCAAGTCAAGAACTCCCTACTCGTCTTAGTTCAACACAATTGTTGCCAAGCATTTGTTTCTGCTCCTGAAGATGATGATGATGGCGCAGACAGATTGAGAGTTAGAACTCAGTACTTGGTGTTGTTTGATAACATAATCCACCGATTGAGATTTCCCAAATTCCTGGAGACTGTGTCGCGGAAGCTTGATGAAGAATGTGTGGAACTTCTCGATGGTTTGCTTCGCGATGGTAGGCTTACCCTGAAACAAATGGTTGACAGAGCAAGTCAAGGGAAAGAAAATGCCGTGGATACAAAAGTTGTACGAGAGATACTGAGTAAACTTTTAACAGCTCGACTTGTCGAACGCTGCCCTGCCCCTGAGCCGGTTGTTTCTACCTCATTTAAAGAAACTACTACTAGGAAGCGGGGTGCTAAGGCTGCCAAGATATTTGAACCACCCGAGACATTAGAACAGCGTGTTGTAGAAGCAGCAGTGCCTGGGGATGCAATCAGATTTTCATTCACTGCAGATATGAAATCTAAAGTTGACAGAGAAACAAATTCAGATGATGATGAAATTGCTAGCGTTCAAGAGAATGATGAAAAAGAGGAGGAAATTCTTTGGCGTGCCAATTTTGAGGAGTTTATTCGTCATCTTAGACATAAGGCATTGATTGAGAATATAAGAACTCAGCATGATGATGGAACTGCTACTGTCTTAAGTGCAGTATTGGAGGCCACAAAAACTGTAGAAAAAAAGGTGAAAATGGAGAATTCAGTTCCCCTGTCGCTTGATACAATTACAGCAGAGGTGATGAAGACCGATACAGGACGAACGATGACTATAGATCGTATCAGAGCTTCCCTTAGTCAGTTGGGCTGTTCACAGAGGATGATTGTAGATGATGCATATAGTATTGATTTGAAGAAAATTATTGAACGGGCTCAAAATGAAGAGGTTGAGTCAATTGTGTTGAAAAGGTATGGAAGGGATGCGTACAGAATGTTCAGGCTACTGTCAAAGGATGGTTGTTTTCATGACACAGATCAGATAGCAGCATCTACTCTGGTTGAGAAAAAGGAGGCTCCAAAGTTGCTATATAGGTTATGGAAGGACAATTACTTGTATATGGAGAAAGTAGTTGCGACGGGAGTAAAGCAAATAACTATTTTGATGTGGAAAGTCAATAAACCTCTGCTTTGGGAACATGTACTGGATGAGATGTACCACGCTGCCTTAAATTTGAGCCTAAGAATGGCTTTTGAGCAGGAAAAGGATGAAGAGCTTTTAAATGTTCCTAAAGACAAGCTTAAGGAGCCAGGGCCACTGCAGAAGAAATACAAACGCCTACTAAATGTCTGGTTACTCCTGGGATCATCATTGACGAAGCTCGATGAAGCTCTCATGCTTTTCCATGATTTCTGA 1554 0.4208 MVTQFGIKLAVHLITNHFGNLVAKVCENLFSHGVLTLDQLVRYSELTKDQVKNSLLVLVQHNCCQAFVSAPEDDDDGADRLRVRTQYLVLFDNIIHRLRFPKFLETVSRKLDEECVELLDGLLRDGRLTLKQMVDRASQGKENAVDTKVVREILSKLLTARLVERCPAPEPVVSTSFKETTTRKRGAKAAKIFEPPETLEQRVVEAAVPGDAIRFSFTADMKSKVDRETNSDDDEIASVQENDEKEEEILWRANFEEFIRHLRHKALIENIRTQHDDGTATVLSAVLEATKTVEKKVKMENSVPLSLDTITAEVMKTDTGRTMTIDRIRASLSQLGCSQRMIVDDAYSIDLKKIIERAQNEEVESIVLKRYGRDAYRMFRLLSKDGCFHDTDQIAASTLVEKKEAPKLLYRLWKDNYLYMEKVVATGVKQITILMWKVNKPLLWEHVLDEMYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLTKLDEALMLFHDF 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03252 517 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 3 517 IPR039748 GO:0003697|GO:0005666
Viun7g03252 517 Pfam RNA polymerase III subunit RPC82 helix-turn-helix domain 8 68 IPR013197 -
Viun7g03252 517 Gene3D - 2 73 IPR036388 -
Viun7g03252 517 Gene3D - 254 348 IPR036388 -
Viun7g03252 517 FunFam DNA-directed RNA polymerase III subunit rpc3 91 174 - -
Viun7g03252 517 FunFam DNA-directed RNA polymerase III subunit RPC3 2 89 - -
Viun7g03252 517 FunFam RNA polymerase III subunit, putative 352 439 - -
Viun7g03252 517 FunFam RNA polymerase III subunit RPC82 family protein 254 348 - -
Viun7g03252 517 Gene3D - 351 439 IPR036388 -
Viun7g03252 517 Gene3D - 91 175 IPR036388 -
Viun7g03252 517 Pfam RNA polymerase III subunit RPC82 153 329 IPR008806 GO:0003677|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03252 K03023 - gmx:100784750 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03252 7 34761959 34769798 Viun7g03252 7 34761959 34769798 ECH