Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03207 ATGATGAGGAGCCCCACATTGGTTAAGATAATTTTTCTTTTGGTGTTTGTTGGGTGGCTCATGGTTTGGATCTTGTTACCCACAAAGGTTTACCGGAACACATGGACACCCCAACTCAAACAAAAATTAAACTCCACATACTTTAGAGAGCAAGGCACAAATCTCTTGCTTTTCACATTCCCCGTTGTCTTCATGGGGGCTCTGGGTTGTATTTATCTCCATCTTCACCTCAAAAAACCTGAAAACCTATCTTCTTCCCAAAGAGGAAGGTTACGTTTGTTGAGAAGGCCAGTTCTTGTGATGTCTCCAATAGGAATTGTGACATCAATGGAGCTTATTTTTGCAGTGATGTTTGGTGCACTCTTGATATGGTCCCTTTCCAATTACCTACACACTAGCTTTGAGCACCTCCATATGCACAAGGAGGGTGAGAAAGTGTGGGAAGCAAAGTTCAGAAGTGTATCTCTGAGAGTTGGATACATAGGAAACATATGTTGGGCATTCCTATTCTTTCCGGTCACAAGAGCATCTTCCATTCTTCCCCTTGTTGGATTGACATCAGAGTCAAGCATCAAGTACCATGTTTGGCTTGGACATTTATCCATGCTGCTTTTTGCTCTGCACACCATAGGTTTCTTTATCTACTGGGCCATCACAGATCAAATGAAAGAGAGCCTAGAGTGGAGCAAGACATATGTATCAAATGTAGCTGGTGTTATTGCAAGTTCAATTGCGTTAGCCATGTGGGTACCAAGCTTTCCTCGGTTGAGGCGTAAAATGTTTGAGCTTTTCTTCTACACTCACCATCTCTACACTCTCTACATCTTATTTTATGCCATTCACGTCGGAGTTGAATACTTGTGCATGATCGCTCCTGGGATCTTCCTCTTCCTCGTTGACAGACACCTCAGATTCTTGCAATCTCGCCAAAATGCACGCTTGCTATCAGCTCGCATTTTACCTTCTGCTGTAGTTGAGCTCAACTTCTCCAAGACTCCAGATTTGTTGTATAACCCCTCGAGCATGGTGTACATAAATGTACCCAAAATTTCGAAGCTGCAGTGGCACCCTTTCACTGTGATTTCTAGTTGTAATATGGAGAAAGATATTCTAAGTGTTGCCATTAAAACTGAGGGTAGCTGGACAAACAAACTCTATCAGCAACTTTCTTCATCTGCTTTGGATCATCTCAACGTATCTGTTGAAGGACCCTATGGACCAACTACTTCACATTTTCTAAGGTACGAAGAGCTTGTGTTGGTGAGTGGTGGAAGTGGCATCACACCCTTCATATCTATAATCCGTGAGCTCATATTTCAAAGCCAGCAAGAATCTCATGTTCCAAGAGTCCTACTTGTTTGTGCTTTCAAAAACTACGTTGATCTAACCATGTTAGATCTTATGCTTTCTGTTTTTGGCTCATCAGACCAAATCTCAAACCTTCGATTTCAAATCGAGGCCTACATTACCAGAGAAAAAGAAGAACCTCCTATAGATTCACAAAAACCGATCCAAACCAAAAGGTTTAAGCCTACCCTCTCAGACACTCCTATATCAGTAGTGTTAGGCCCAAACAACTGGCTATGGCTTGGTGCTATAATCTCATCATCCTTTCTCATGTTCCTCCTTCTCCTGGGGATAATCACTCGTTACTACATATACCCTATTGAAAATAATTCAGATGATGTTTACCATTGGACCTTTAAGGTTTTGTGGTTTATGTTTCTACTTTTTGCAGTGGTGTGTGTATGTTCTAGTGCAGTTTTTCTGTGGTGGAGGAGACAAAACACCTTGGAAAGTAAGCAAATCATGAATGTAGAAGTTCCAACACCAACAACATCACAAGGGTCATGGATATATGGGTCAGAGAGAGAGCTCGAAAGCCTTCCCCATCAGTCTCTGGTGCAAGCAACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGTTTGATTGCAAAGGAAAAGATGTTGGAGTCTTGGTGTGTGGCCCAAGGAACATGAGACATGAAGTTGCCAGAATTTGTGCTTCTGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTTACATGGTGA 2088 0.42 MMRSPTLVKIIFLLVFVGWLMVWILLPTKVYRNTWTPQLKQKLNSTYFREQGTNLLLFTFPVVFMGALGCIYLHLHLKKPENLSSSQRGRLRLLRRPVLVMSPIGIVTSMELIFAVMFGALLIWSLSNYLHTSFEHLHMHKEGEKVWEAKFRSVSLRVGYIGNICWAFLFFPVTRASSILPLVGLTSESSIKYHVWLGHLSMLLFALHTIGFFIYWAITDQMKESLEWSKTYVSNVAGVIASSIALAMWVPSFPRLRRKMFELFFYTHHLYTLYILFYAIHVGVEYLCMIAPGIFLFLVDRHLRFLQSRQNARLLSARILPSAVVELNFSKTPDLLYNPSSMVYINVPKISKLQWHPFTVISSCNMEKDILSVAIKTEGSWTNKLYQQLSSSALDHLNVSVEGPYGPTTSHFLRYEELVLVSGGSGITPFISIIRELIFQSQQESHVPRVLLVCAFKNYVDLTMLDLMLSVFGSSDQISNLRFQIEAYITREKEEPPIDSQKPIQTKRFKPTLSDTPISVVLGPNNWLWLGAIISSSFLMFLLLLGIITRYYIYPIENNSDDVYHWTFKVLWFMFLLFAVVCVCSSAVFLWWRRQNTLESKQIMNVEVPTPTTSQGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFDCKGKDVGVLVCGPRNMRHEVARICASGLADNLHFESISFTW 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03207 695 PANTHER NADPH OXIDASE 13 693 - -
Viun7g03207 695 FunFam Ferric reduction oxidase 3 404 521 - -
Viun7g03207 695 Gene3D - 399 527 IPR039261 -
Viun7g03207 695 Gene3D - 586 693 IPR039261 -
Viun7g03207 695 Pfam Ferric reductase like transmembrane component 159 277 IPR013130 -
Viun7g03207 695 SFLD Ferric Reductase Domain 27 695 - -
Viun7g03207 695 CDD NOX_Duox_like_FAD_NADP 314 491 - -
Viun7g03207 695 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 307 411 IPR017927 GO:0016491
Viun7g03207 695 Pfam Ferric reductase NAD binding domain 415 679 IPR013121 GO:0016491
Viun7g03207 695 SFLD Ferric reductase subgroup (FRE) 9 695 - -
Viun7g03207 695 Pfam FAD-binding domain 311 408 IPR013112 GO:0016491
Viun7g03207 695 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 415 690 IPR039261 -
Viun7g03207 695 PRINTS Cytochrome B-245 heavy chain signature 261 281 IPR000778 GO:0016020|GO:0016491
Viun7g03207 695 PRINTS Cytochrome B-245 heavy chain signature 611 629 IPR000778 GO:0016020|GO:0016491
Viun7g03207 695 PRINTS Cytochrome B-245 heavy chain signature 236 259 IPR000778 GO:0016020|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03207 Viun-Chr7 34492782 34496973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g03207 2 695 Miscellaneous Gene Families AT5G23980 58.262 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03207 K00521 - gmx:112998154 1160.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03207 7 34492782 34496973 Viun7g03207 7 34492782 34496973 ECH