Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g03137 ATGATGATGAGAATAGGAAATTTTAATCATGTGGAGGCCAGGGTGTCTTTGATACAGCAATGGTTTTTTCTCCGAAGATTGTCTCTGTGGTCGATGAAGAAGGAAGCAGAGTTAGAATCAGCACTCTCACGCAATCGACGATGGATAGTGAACAACCAGATAAAGAACATCATCCTCCGATATCCCAACAACGAAATCCCCATCGAAACCCTTCAGAAGAAGTTCAAAACCCTCGATCTCCAGGGCAAAGCCCTCAACTGGCTCTCTAAGTACCCATGCTGCTTCGAAATCCACGATAACCGCTGCCGCCTCACCAAACGCATGATGAACCTCGTCGCACAGGAACACTCCCTCATCGACTCCCTCCAACCCCTCTTCGCTCGCCGCTTGGCCAAACTTCTCATGCTAACCCTCCGCAACAGACTCACCGTCCTCAAAATCAACGAATTCAAACGCGCGTTTGGCTTCCCCGACGATTACGTAATCAGGATCCTGCCCAACTACCCTAATTTGTTCCGTATCGTCAACGAGAGCGGCAGGAGGAGTTCCATGGCCATTGAGTTGCTGCATTGGGACCCTGACCTCGCAGTCTCCGCCGTCGAATCCTCCGCTGCGAAGCACGGTACGCCGCCACGTTTTTCATGTTCCTTGCCGTCTAGTTGGGTGAAATCCTGGGAGAGATTTCGCGAATTCGACGAAATTCCTTACATTTCGCCGTATTCGGATCCTCGAGGTTTGGTGGAGGGGTCCAAGGAGATGGAGAAGAGGAATGTCGGTTTGGTACATGAGTTGTTGTCTTTGACTCTTTGGAAGAAGGCTTCGATTGTGAAGTTGGGGCATTTTAAGAGGGAGTTCCTTTTGCCCGATAGGTTGAATGTGTTCTTGCTCAAGCACCCTGGGATTTTCTATGTTTCCAATAAGTATAAGATTTACACTGTGCTTCTTAGGGAGGCCTATGTCGGGTCTCAGCTTGTGGATAAGGATCCTTTGGTGGTTGTGAAGGAGAAGTTTGGGGACTTGATGCAGGAGGGGCTTCATGAATACAATCAGAGGCGTCGCCTCCTCAATGTTGAAAAGAGAAGGAGGTCAGGGGTTCCATTGATTAGTGTAGATGGTGCAAAGGGTAGAAGGAGAAGTCACGAAGTTGATGATGATTATGGTGATAGTAATGGTGCAGATAGTAAGGTGGGAGGGTTATTTGACCCTGAAGAAAGAAAACGGTTTTATAGAGTTCTCTTTGATGATGATGTTTCTTGA 1257 0.4805 MMMRIGNFNHVEARVSLIQQWFFLRRLSLWSMKKEAELESALSRNRRWIVNNQIKNIILRYPNNEIPIETLQKKFKTLDLQGKALNWLSKYPCCFEIHDNRCRLTKRMMNLVAQEHSLIDSLQPLFARRLAKLLMLTLRNRLTVLKINEFKRAFGFPDDYVIRILPNYPNLFRIVNESGRRSSMAIELLHWDPDLAVSAVESSAAKHGTPPRFSCSLPSSWVKSWERFREFDEIPYISPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKASIVKLGHFKREFLLPDRLNVFLLKHPGIFYVSNKYKIYTVLLREAYVGSQLVDKDPLVVVKEKFGDLMQEGLHEYNQRRRLLNVEKRRRSGVPLISVDGAKGRRRSHEVDDDYGDSNGADSKVGGLFDPEERKRFYRVLFDDDVS 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g03137 418 Pfam Plant organelle RNA recognition domain 33 344 IPR021099 GO:0003723
Viun7g03137 418 MobiDBLite consensus disorder prediction 374 398 - -
Viun7g03137 418 MobiDBLite consensus disorder prediction 374 390 - -
Viun7g03137 418 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 27 361 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g03137 Viun-Chr7 33972547 33974387 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g03137 - - pvu:PHAVU_007G079300g 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g03137 7 33972547 33974387 Viun7g03137 7 33972547 33974387 ECH