Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02981 ATGGGTGGTTCCATTTTCACTCACTTCCTCCTTCTCCCTTCCACTTCTTCTCCCTCTCTTTCCACTCTATTCCCATCCAAGTTCAATGACTCTGTTCCCTTCACCCTTTTCTGCAACCAATTCCCTTCCAAACTCTCTACATCCTCCCCTTCCCAATCCTCGCATCCTCGTCGTTACTCATGTTCTGTAAAAAAGGTAAATGCCTTCGGAATTCAGCAAAAATGTTCCATACGACATGGAGACAATCTTGATGCAGTGAAGAGCGGGATTTTGCTGCAGAAGTTTCAAAGGAAAATGCCAACGGAATTCCTTAGTAACCTTTTCAACAAACAATTTACAAGATTTTCAGTGAATGACTTTACAACCAAACATCTTGAAGGAGATGCAAGATCATCCAAATGGGTTTCAGCATTCTTGTTTGGGCAAACTATATCAGTGATTTCTCCTGATGTTTCTTATGCAAGCAGCTCAATGAAGATAAACGAGTTATATGAGGTTGGAGAATTGTTTGATTTAAGCATCCAACTAATATACTTGGTATTGCTACTGGGTTTGTTAGGGACCGGGACTTTTTTTGTGATTCGCCAAGTTCTTGTCCGCAGAGAACTGGACCTATCTGCCAAAGAGTTGCAGGAACAAGTAAGAAGCGGTGATGCTGGTGCAACTGAGCTTTTTGAACTTGGTGCTGTGATGCTGCGCAGGAAATTTTACCCTGCTGCTACCAAGTACTTGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCTGATCTTGCTCAGGTTTACAATGCTCTTGGTGTAAGCTATGTCCGAGATGGGAAAGTTGACAAGGGAATTGCTCAGTTTGAGACAGCTGTGAAGCTTCAACCAGGCTATGTCACTGCTTGGAATAATCTTGGAGATGCTTATGACAGTAAAAAGGATTACAAGTCTGCTTTGAAAGCATTTGAAGAAGTCCTACTATTTGATCCTAACAACAAGGTTGCAAGGCCTAGGAGAGATTCTTTGAAGGGACTTGTTGAAGCAGCCAAAGGAGTTACCGTCACAAAATCAACTGAGAAGAAATGA 1068 0.4213 MGGSIFTHFLLLPSTSSPSLSTLFPSKFNDSVPFTLFCNQFPSKLSTSSPSQSSHPRRYSCSVKKVNAFGIQQKCSIRHGDNLDAVKSGILLQKFQRKMPTEFLSNLFNKQFTRFSVNDFTTKHLEGDARSSKWVSAFLFGQTISVISPDVSYASSSMKINELYEVGELFDLSIQLIYLVLLLGLLGTGTFFVIRQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKYLLQAIEKWDGDNPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAYDSKKDYKSALKAFEEVLLFDPNNKVARPRRDSLKGLVEAAKGVTVTKSTEKK 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02981 355 Gene3D Tetratricopeptide repeat domain 215 337 IPR011990 GO:0005515
Viun7g02981 355 ProSiteProfiles TPR repeat profile. 293 326 IPR019734 GO:0005515
Viun7g02981 355 ProSiteProfiles TPR repeat region circular profile. 293 326 - -
Viun7g02981 355 Pfam Tetratricopeptide repeat 264 323 - -
Viun7g02981 355 ProSiteProfiles TPR repeat profile. 259 292 IPR019734 GO:0005515
Viun7g02981 355 SUPERFAMILY TPR-like 221 330 IPR011990 GO:0005515
Viun7g02981 355 PANTHER LD24721P 219 342 IPR047150 -
Viun7g02981 355 SMART tpr_5 259 292 IPR019734 GO:0005515
Viun7g02981 355 SMART tpr_5 221 254 IPR019734 GO:0005515
Viun7g02981 355 SMART tpr_5 293 326 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02981 Viun-Chr7 32801342 32805131 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02981 - - gmx:100800455 439.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02981 7 32801342 32805131 Viun7g02981 7 32801342 32805131 ECH