Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02977 ATGGCTGACATTGCCATGGCACAAACGAGTAACAATAACAAGAACCCAGAACAAGAAAAACATGAAAACTTCCCAGTTTTAACGGTGCTCAAGAACAACGCCGTTCTCAGGAATATCTTCCTCGTACACGACGGCAACAGCGAAGATCAGACGGTCCTGATTGGGCGACATCCTGACTGCGACATTGTCCTCATGCACCCCAGCGTGAGCCGCTTCCACCTCAGGATTCGCTCCAACCCTTCTTCCCGCACTCTTTCTCTCGTTGATTTGGCTTCTGTGCATGGTACGTGGGTGCGTGGGATGAAGCTGGAGCCCGGGGTGAGTGTGGAGTTGAAGGAAGGTGACACCTTCACTGTAGGGGTTTCTACTCGGCTTTATCGTCTCAGCTGGGTCCCTCTTACCCAATTGAATGTCTTTGTGCCCCATCAACAACAAAAAGAAGATGAACAAGAAGAGATAATCAAGGATGAGAATTTGGAATATAGTTTGGAACAAGAGATTCCGGAGGATGAAGACGTGGTTTCTGTTTGTTGTGATGAAGAAAGCAAGAGCCATTCTGAAGATAAGGGATTGGGAGTTATCAATGGAACTGAAACATCGTGTTTTCCTACACACTCTGGTGATGAAAATATACATTGTGACCGTCAAATTAGTGTTTTATCACCACCACATGTTTTATCACCCCCTTGTGCAAAATTAGTTGATGAACTTTATTACACTGAGAAAATTGAAGCTTGTCCGAAACTGGAGATGCCTGGAGAGACTAATTTGCTTTGCACATTCAGAGAGTACTTGACACAGAGCTTATGTCTGCCTGTTGTGAAAGCGGTCCAGGGGACCAAAATGGAGCAATTTCAAGCCCCACATGGTACAATCGCAAAACAACCACCTTCTTTGGAAATGCTTTGGTCCAGCTTGTTTACAAATATTGATCCTGCGACTTTTGATGAAAGGGATGTTGCTGCAGTCGCTGTAATACCTTCAGAATCTGACAAGGTTGAAGATATTTTAACTACTGAACCAAGAACTTTCAATTCTGATAACATGTGTTTGATAGTTGAGAAAGATCTTTCTGTTTCTGAATTTCATCAAATTGAAGCTGTTGAAGAATTTTCTGTGGATTCAGTACCTGAAGGAGAAAAACAAGGTGAAATTCACTGGTCCAGCTTGCCTACAAATATTGGTCCCTCATCTTTCGATGTAAAAGATGTTGCTGCAGTGGCTGCAATACCTACAGAATCTGAGTTTGGAATCACACATGGAGATAATGACAAGGTTGGAAATATGTGTTTGATGGTTGACAAAGATATTCCTGATTCTGTATTTCATCAAGTGGAAGTTACTGAAGAAGTTTCTGTGGATTCAATACATGATGGAGAAAAACATGATGAATGCAAGGAAGAGTACACCTCAAAGTTGCAGGATCAGAATGGAAAAATTTTCCATGAGGAAGGGTATTCTCGAGATGAAATAGTTGAAGAAGATAATGGAAACAAACGTGTTAAAAGCGTAGAACCTGCATCTTTTATTGAAAAGAGCTTAGCTGTAGTAACTCTGATACTCACAGAACCTGAATTTGGATGCACATTAGGGGATAAGGAAATGACTGAAGATATTTTAGAAACGGAGTCACGAACTATCAATCCTGAGAACACATCCTTGCTGTATGAGGAAGATATTCCTGTTTCCAAATTTCAACCAATCAATATTGTTGAAGATGTTATGGATTCAATATCTGATGGCAAGGAGTTGGAGTCAAAGTTGCAGGCTTCCGTAGATGCTAAATGCTGTCAGGAATCTGGTAACTCAGTGGATGAAATAGCTGACGGTAAATGCTGTCAGGAATCTGGTAACTCAGTGGAAGAAATAGCTGAAGATAATGAAAAAAATTGTACAAAGAGCATCTCCTCCACGTCATTCCATATAGAATCTCCAAATTCTTCATTGCTTTCGGAAGTTTTTTCGAACATTACAGCTGAGAACCAGACCCCTCAATCTCTCACTTCTGTGACAGGACGCTCTAGAGGGGCATTCCTTGAAAAACATGTAGAATCAACAGAGAAAAGTTCAACCTTTGGCAGTATTCGGTCAAGAGGGTGTAAGGCTGCTAGTGCTCCCCATGTTCGAGCCAGAAAGAGTAGATCTAAGGTTGGCACTGAAGTTAAAAAGAGTAATGTGAAAGATGCCATGAATAAATCAATGCCAAAGGACCTTTCCTCTCTCTTTGATGTTGAAGAAAAAAATTTCACTTCAAATAAGGAAAACTTAAGCTCAAACTCCTATCACTTGCAGCTCATGAGAAAGAAAGCTAAGCTACAAGAAATTAAATTTCCCATGTCACCAAGATCACCCAATTTGAGCTGTTTTAGTCCCAGCATTCATTCATCCAAAAGCATAAGCACTGTTTCAAATAAAGTGAACTTAACTACAAAAGTAGCTCAAGAATTGAAGTCACAAAGAAAGCCTCTCAAATGTCTTGTCAACTTGGTCCATGAGCAAGATATGATGGAATTAAAGAAAAGAGTGGAAAGGGTACCCTTCCGATCAGTAATGAACTCTGGAAGCAATCATAATTCAGTGACTATTTCTGCTGCAGAAAGTATGAATGATGCCGGTATTTGTGGGCAGATCTCAAACAAGTGCACTAAACCTTCTCTGCAGCAGCATACTAGTAGAGAACAAAAGAGGAGCTGGGACATGGTTGTAGACACTGCTTCTCTTGTGAACAAGGAGTCAAGAAAAGCTTTGCAGCTTCTACAAGGTCTCAAGGGGACTCGTTTAATCATTCCAAGATCGGTCATAAGGGAACTAGGCTGTATGAAGCAACAATTTAGACTTTTCAGAAGAACTTTAGAGGCTACTTTGGCATTAGAATGGATTAAAGAATGCATGGAGAAAACAAGCTGGTGGATTCATATCATGGAAGAAGAGTGCAGGCTGACAGTTCCAACCCTTTCTGCTTCTCCGCAGACTCAGTTTGTTGAAGAGAGTTGGGCATTTCCTGGTTTCACGACTTCACCTGCTGTTGAAGATAACATCCTTGAATTTGCTCTTCAATATAGAAAAAAGGAGAATGTTGGACAACTTGTCCTACTTAGTCATGATGTTACATTGAAAGTAAAATCCATGGCAAAGGGGTTGCTGTGTGAGACAGTGCAACAATTTCGCCAAAGTTTAGCAAACCCCTTCTCTGAGAGGTTCATGTGGCCCAAGAGCTCTCCTCGAGGACTGACTTGGTGTTGCCAAGATGATTTAGTTTTAAGGGAGAAATATTGTGGATTGACATCTAAGACTGGTTTGAAGGTCATTTCCTGA 3315 0.4112 MADIAMAQTSNNNKNPEQEKHENFPVLTVLKNNAVLRNIFLVHDGNSEDQTVLIGRHPDCDIVLMHPSVSRFHLRIRSNPSSRTLSLVDLASVHGTWVRGMKLEPGVSVELKEGDTFTVGVSTRLYRLSWVPLTQLNVFVPHQQQKEDEQEEIIKDENLEYSLEQEIPEDEDVVSVCCDEESKSHSEDKGLGVINGTETSCFPTHSGDENIHCDRQISVLSPPHVLSPPCAKLVDELYYTEKIEACPKLEMPGETNLLCTFREYLTQSLCLPVVKAVQGTKMEQFQAPHGTIAKQPPSLEMLWSSLFTNIDPATFDERDVAAVAVIPSESDKVEDILTTEPRTFNSDNMCLIVEKDLSVSEFHQIEAVEEFSVDSVPEGEKQGEIHWSSLPTNIGPSSFDVKDVAAVAAIPTESEFGITHGDNDKVGNMCLMVDKDIPDSVFHQVEVTEEVSVDSIHDGEKHDECKEEYTSKLQDQNGKIFHEEGYSRDEIVEEDNGNKRVKSVEPASFIEKSLAVVTLILTEPEFGCTLGDKEMTEDILETESRTINPENTSLLYEEDIPVSKFQPINIVEDVMDSISDGKELESKLQASVDAKCCQESGNSVDEIADGKCCQESGNSVEEIAEDNEKNCTKSISSTSFHIESPNSSLLSEVFSNITAENQTPQSLTSVTGRSRGAFLEKHVESTEKSSTFGSIRSRGCKAASAPHVRARKSRSKVGTEVKKSNVKDAMNKSMPKDLSSLFDVEEKNFTSNKENLSSNSYHLQLMRKKAKLQEIKFPMSPRSPNLSCFSPSIHSSKSISTVSNKVNLTTKVAQELKSQRKPLKCLVNLVHEQDMMELKKRVERVPFRSVMNSGSNHNSVTISAAESMNDAGICGQISNKCTKPSLQQHTSREQKRSWDMVVDTASLVNKESRKALQLLQGLKGTRLIIPRSVIRELGCMKQQFRLFRRTLEATLALEWIKECMEKTSWWIHIMEEECRLTVPTLSASPQTQFVEESWAFPGFTTSPAVEDNILEFALQYRKKENVGQLVLLSHDVTLKVKSMAKGLLCETVQQFRQSLANPFSERFMWPKSSPRGLTWCCQDDLVLREKYCGLTSKTGLKVIS 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02977 1104 CDD FHA_PS1-like 24 133 - -
Viun7g02977 1104 SMART FHA_2 51 103 IPR000253 GO:0005515
Viun7g02977 1104 SUPERFAMILY SMAD/FHA domain 25 143 IPR008984 GO:0005515
Viun7g02977 1104 Gene3D - 894 1060 - -
Viun7g02977 1104 Gene3D - 3 133 - -
Viun7g02977 1104 MobiDBLite consensus disorder prediction 1 22 - -
Viun7g02977 1104 PANTHER TRANSMEMBRANE PROTEIN 18 13 1103 - -
Viun7g02977 1104 Pfam FHA domain 53 120 IPR000253 GO:0005515
Viun7g02977 1104 ProSiteProfiles Forkhead-associated (FHA) domain profile. 52 103 IPR000253 GO:0005515
Viun7g02977 1104 Pfam PIN domain 900 1052 IPR002716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02977 Viun-Chr7 32792068 32796954 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02977 - - var:108324357 1684.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g02977 7 32792068 32796954 Viun7g02977 7 32792068 32796954 ECH