Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01962 ATGGGGTCTGAAGGTTCTCCAGCAGCTGTAACAACAACAGTTCATGTAACAGGTTTCAAGAAATTCCATGGGGTTTCAGAGAATCCAACGGAGACAATTGTGAATAATTTGATGGAGTATTTGAAGAAGAAGGGTTTGCCAAAAGGGTTAGTTATTGGAAGCTGCAACATTCTTGAGACTGCTGGTCAAGGAGCACTCGTTCCCCTCTATCAGACATTGCAGTCTGCCATTACTTCCAAGGAGTCTGAATCTCCAAGTTCCAACAGAATTATCTGGCTGCATTTTGGGGTTAATAGTGGTGCAACAAGGTTTGCTATAGAGCGTCAAGCTGTCAATGAAGCTACCTTCCGCTGCCCTGATGAAATGGGATGGAAACCCCAGAAAGTGCCTATTGTTCCTTCAGATGGTCCAATTACACGAATACGTGAGACTACACTTCCCGTGGAGGACTTCACCAAAGTCCTGACAAGTAAGGGTTATAATGTAATGACATCTGATGATGCAGGCAGGTTTGTGTGCAACTATGTTTACTATCATTCCCTTCGCATTTCGGAGCAGAACGGGATCAAATCCCTTTTTGTGCACGTGCCACTCTTCTCTACAATCAATGAAGAGACCCAAATGCAATTTGCTGCTTCCTTGCTAGAGGTACTTGTTTCATCATGCTAG 669 0.441 MGSEGSPAAVTTTVHVTGFKKFHGVSENPTETIVNNLMEYLKKKGLPKGLVIGSCNILETAGQGALVPLYQTLQSAITSKESESPSSNRIIWLHFGVNSGATRFAIERQAVNEATFRCPDEMGWKPQKVPIVPSDGPITRIRETTLPVEDFTKVLTSKGYNVMTSDDAGRFVCNYVYYHSLRISEQNGIKSLFVHVPLFSTINEETQMQFAASLLEVLVSSC 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01962 222 CDD Peptidase_C15 13 220 IPR000816 GO:0005829|GO:0006508|GO:0016920
Viun7g01962 222 PIRSF Pyrrolidone-crbxlat_pptds 11 222 IPR000816 GO:0005829|GO:0006508|GO:0016920
Viun7g01962 222 Pfam Pyroglutamyl peptidase 14 200 IPR016125 -
Viun7g01962 222 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 13 220 IPR036440 -
Viun7g01962 222 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 9 220 IPR016125 -
Viun7g01962 222 FunFam Pyrrolidone-carboxylate peptidase isoform A 11 221 - -
Viun7g01962 222 Gene3D - 10 222 IPR036440 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01962 Viun-Chr7 24727968 24731341 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01962 K01304 - gmx:100500630 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01962 7 24727968 24731341 Viun7g01962 7 24727968 24731341 ECH
Viun1g02960 1 38315334 38318326 Viun7g01962 7 24727968 24731341 PCT