Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01793 ATGGCCGTGACCACTCCCTATCTCAATGCCACAGAAAAAAAGCACTGGTGGCTCACCAACCGTAAGGTTGTTGAGAAATACATCAGAGACGCTCGCACTCTGATGGCCACGCAGGAACAGAGCGAGATCGCTTCGGCGCTCAACCTTCTCGACGCGGCTCTGGCGATCTATCCGCGGCTCGACGAAGCGCTGGAGCTGCGAGCGAGGTCTCTGCTCTGTCTGCGGAGGTTCAAAGAGGTAGCGGATATGCTTCAGGACTACATCCCGAGCCTGAAAATGGCGAACGATGAGTCGGTTTCTTCGGATAGTTCTTCGCAACAACTCTCTAGGGAGGGCGCGAAGCTCCTCTCCTCTGATACCTCGGGTTCGGATCAGAGCTTCAAGTGCTTCTCTGTCTCTGACTTGAAGAAGAAGGTTATGGCAGGGCTGTGTAAAAGTTGCGACAAGGAAGGGTATTGGAGATACTTGGTTCTGGGGAAAGCATGCTGCCACCTAGGCCTAATGGAAGACGCAATGGTTCTTCTCCAAACGGGTAAACGCCTAGCCTCCGCCGCATTCCGCCGCGAGAGCGTGTGCTGGTCCGACGATAGCTTCTCCCTCTCGAACCCCCTCTTCTCCGGCGACTCAAGCCCACCCCGGGTCCCACTCCCGGAGTCTGAAGCAGTGACTCAACTCCTCGCCCACATAAAGCTCCTCCTCCGGCGCCGTGCTGCCGCGCTGGCTGCCCTGGAAGCCGGCCTCCACTCCGAGGCCATCCGCCACTTCTCCAAAATTGTGGACGGGCGCCGCGGTGCCCCGCAGGCCTTCCTCGCCGAGTGCTATATGCACAGGGCCTCCGCTCACCGGTCCGCCGGCCGAATCGCCGATTCAATTGCCGATTGCAACAGAACCCTCGCCTTGGACCCCACCTGCATCCAAGCTCTGGAAACCCGAGCCTCTCTTCTGGAATCCATTCGTTGCTTCCCAGATTCACTCCATGACCTCGAACACCTCAAACTCCTGTACAACACCATCTTGCGCGACCGTAAACTCGCCGGTCCTGCCTGGAAGCGCCAAAACGTGCGCGCCAGAGAAATTCCTGGGAAACTCTGTGCCCTCACCACGAAGATGCAGGAACTGAAACAGAGGGTAGCTTCGGGAGACACCTCCAACGTGGACTACCACGGTCTCATCGGCTTGCGCCGCGGCTGTGGTCGTTCGGAGTTGCAGAGAGCGCATTTGCTTCTGTCTCTGAAACACAAGCCCGACAAGGCAATGTGCTTCATCGAGCGGTGCGAGCTGGCTGACGAGCGGGACCTCGATTCCGTCAAGGAGAGGGCGAGAATGTCGTCGCTCTTGCTCTACCGGCTGCTCCAGAAGGGTTACACCAACGTGATGGGTGCCATAATGGACGAAGAGGCTGCTGAGAAGCAAAGGAAGAAAAAGGTTCTGGAAGCTCTGGAAGCTCAGGCTAAAGTCGAGAAATTGGAAAACAAAAAGTGCACCGTTTCGTCTCCCTCCACCGCCAATCCCGCGGTTTTTCAGGGAGTCTTTTGCCGCGATCTTGCGGTGGTTGGAAACTTGCTCTCGCAAACGGGATTCAACCGTTCCATTCCGGTCAAGTACGAGGCGTTGAGCTGCTGA 1623 0.5724 MAVTTPYLNATEKKHWWLTNRKVVEKYIRDARTLMATQEQSEIASALNLLDAALAIYPRLDEALELRARSLLCLRRFKEVADMLQDYIPSLKMANDESVSSDSSSQQLSREGAKLLSSDTSGSDQSFKCFSVSDLKKKVMAGLCKSCDKEGYWRYLVLGKACCHLGLMEDAMVLLQTGKRLASAAFRRESVCWSDDSFSLSNPLFSGDSSPPRVPLPESEAVTQLLAHIKLLLRRRAAALAALEAGLHSEAIRHFSKIVDGRRGAPQAFLAECYMHRASAHRSAGRIADSIADCNRTLALDPTCIQALETRASLLESIRCFPDSLHDLEHLKLLYNTILRDRKLAGPAWKRQNVRAREIPGKLCALTTKMQELKQRVASGDTSNVDYHGLIGLRRGCGRSELQRAHLLLSLKHKPDKAMCFIERCELADERDLDSVKERARMSSLLLYRLLQKGYTNVMGAIMDEEAAEKQRKKKVLEALEAQAKVEKLENKKCTVSSPSTANPAVFQGVFCRDLAVVGNLLSQTGFNRSIPVKYEALSC 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01793 540 SMART tpr_5 152 185 IPR019734 GO:0005515
Viun7g01793 540 SMART tpr_5 271 304 IPR019734 GO:0005515
Viun7g01793 540 Coils Coil 463 492 - -
Viun7g01793 540 Gene3D Tetratricopeptide repeat domain 9 498 IPR011990 GO:0005515
Viun7g01793 540 PANTHER OS01G0273500 PROTEIN 9 540 - -
Viun7g01793 540 SUPERFAMILY TPR-like 237 333 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01793 Viun-Chr7 23031117 23034235 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01793 - - gmx:106797171 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01793 7 23031117 23034235 Viun7g01793 7 23031117 23034235 ECH
Viun1g02803 1 37304301 37307585 Viun7g01793 7 23031117 23034235 PCT