Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01753 ATGACTTTCTTCTCCCTTTCCCTCACCATTCTCCTTTCCCTTCTCTCTGTTTTTCTTCTACATGCCAATGCTTACAATCACCCCATTCACCATCGCCACCCTCGTTTTGCCACTCATAACTACAGAGATGCTCTCACCAAATCCATTCTCTTCTTCGAAGGCCAGAGGTCAGGGAAGCTCCCTCCTAACCAGAGAATGTCTTGGAGGAGGGACTCTGGTCTTTCTGATGGCGCAGCCATGCGTGTTGATTTGGTTGGAGGGTACTATGATGCTGGGGACAATGTCAAATTTGGCTTCCCCATGGCCTTCACCACCACCATGCTCTCATGGAGCGTCATTGAGTTTGGTGGGCTTATGAAAGGTGAGTTGCAGAATGCCAGAGTGGCCATTCGCTGGGCCACTGATTATCTTCTCAAAGCTACTGCACATCCTAACACCATTTATGTTCAGGTGGGGGATGCTAAGAAGGACCATTCTTGTTGGGAGAGACCAGAGGACATGGACACTCCAAGAAGCGTGTTCAAAATAGATGCAAACACACCTGGTTCAGAAGTTGCCGCGGAAACTGCTGCAGCTCTTGCAGCTGCTTCTCTGGTTTTTAGAAGAACTGACCCTACATACTCAAAAGTTTTAGCTAGAAGGGCCATCAGGGTATTCCAGTTTGCTGATAAGTACAGGGGGTCCTACAGCAATGCCTTGAAACCCTTTGTGTGTCCCTTCTACTGCTCTTACTCTGGTTATCAGGATGAGCTGTTGTGGGGTGCTGCCTGGCTGCACAAGGCTACAAAGAATCCGATGTACCTAAACTACATTAAAGTTAATGGCCAGATCCTTGGAGCTGCAGAGTTTGACAACACCTTTGGGTGGGATAACAAGCATGCTGGAGCGAGAATACTTCTTTCCAAGGAATTCCTGGTTCAAAGGGTACAATCCCTCCATGACTACAAGGGCCATGCGGACAATTTCGTTTGTTCCCTAATTCCTGGGACCTCTTTCTCTTCCACCCAGTATACACCAGGTGGTCTTCTTTTCAAGATGAGTGATAGCAACATGCAATATGTCACATCCACCTCCTTCCTGCTGCTAACATACGCCAAATACTTAACCTCAGCTCATACGGTTGTTAACTGTGGTGGAATCGCAGTAACACCAAAGAGGCTTCGGTCAATAGCTAAGAAACAGGTGGATTACTTGCTTGGAGACAACCCCTTAAAGATGTCGTACATGGTGGGGTATGGTCCAAGGTACCCAAGAAGGATACACCACAGGGGTTCATCTCTACCGTCCATTGGTGTACACCCTGGAAAGATCCAATGTCGTGCAGGCTTCGGTGTGATGAATTCACAGTCCCCCAACCCAAACATTCTAGTGGGGGCTATTGTTGGTGGACCGGACCAACATGATAGGTTCCCAGATGAACGGTCAGATTATGAGCAATCAGAGCCAGCCACATACATTAACTCACCCCTTGTAGGAGCACTCGCTTATCTTGCTCACTCATTTGGTCAACTCTAA 1515 0.4792 MTFFSLSLTILLSLLSVFLLHANAYNHPIHHRHPRFATHNYRDALTKSILFFEGQRSGKLPPNQRMSWRRDSGLSDGAAMRVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMKGELQNARVAIRWATDYLLKATAHPNTIYVQVGDAKKDHSCWERPEDMDTPRSVFKIDANTPGSEVAAETAAALAAASLVFRRTDPTYSKVLARRAIRVFQFADKYRGSYSNALKPFVCPFYCSYSGYQDELLWGAAWLHKATKNPMYLNYIKVNGQILGAAEFDNTFGWDNKHAGARILLSKEFLVQRVQSLHDYKGHADNFVCSLIPGTSFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAHTVVNCGGIAVTPKRLRSIAKKQVDYLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSIGVHPGKIQCRAGFGVMNSQSPNPNILVGAIVGGPDQHDRFPDERSDYEQSEPATYINSPLVGALAYLAHSFGQL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01753 504 FunFam Endoglucanase 37 502 - -
Viun7g01753 504 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 397 423 IPR018221 -
Viun7g01753 504 SUPERFAMILY Six-hairpin glycosidases 38 502 IPR008928 GO:0005975
Viun7g01753 504 PANTHER ENDO-1,4-BETA-GLUCANASE 14 499 - -
Viun7g01753 504 Gene3D - 36 504 IPR012341 GO:0005975
Viun7g01753 504 Pfam Glycosyl hydrolase family 9 41 494 IPR001701 GO:0004553|GO:0005975
Viun7g01753 504 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 470 488 IPR033126 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01753 Viun-Chr7 22448405 22450932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01753 6 500 Glycoside Hydrolase AT1G02800 76.200 0.0 775
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01753 K01179 - gmx:100777718 952.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01753 7 22448405 22450932 Viun7g01753 7 22448405 22450932 ECH
Viun1g02776 1 37139293 37141586 Viun7g01753 7 22448405 22450932 PCT