Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01398 ATGGATTTCATGGAGAAGCTGAAAATTTGGAAGAAAAAAACAGACAAAGAATGTGAAGGCCCTCCTGTGTTGTGGTTCGAAACCTCTGTCTCTGTTTGTCGCCGCTTCCAGTTTGAACCCCATGGCCAACTCTCCGTGACTACTATTGGTGATTCTCGGCCAATATACCACAAGATTGTTGACTCATTCCTGAATAAATTTTTCCCTTCAGGATATCCGTACAGTGTGAATGAAGGTTACCTCAGATACACACAGTTTCGAGCACTGCAACACACTGCCAGTGCAGCTCTATCTGTGTTATCGACTCAGTCACTGCTATTTGCTGCAGGCTTGCGGCCCACTCCTGCACAAGCAACTGCTGTTAGTTGGATTTTAAAGGATGGCATGCAACATTTGGGGAATCTAATATGCAGCAATTTAGGTGCAAGAATGGATTCTGAGCCTAAACGTTGGAGAATTTTAGCTGATGTGCTCTATGATATAGGCACTGGTTTGGAAGTGCTTTCTCCCTTGTGTCCTCAGCTCTTTCTTGAAATGGCTGGCCTTGGAAATTTTGCCAAGGGAATGGCAGTTGTTGCATCAAGAGCTACAAGATTACCTATATATTCTTCATTCGCTAAAGAAGGAAATCTAAGTGACCTATTTGCTAGAGGGGAGGCTATTTCAACTCTCTTCAATGTTGTTGGAATTGGAGTTGGAATTCAATTAGCATCGACTGTATGTGCATCAATGCAGGGAAAGTTGGTTGTGGGACCTCTACTATCATTTATACACATATACAGCGTTACTGAAGAAATGAGAGCTACTCCTGTGAATACCTTGAATCCACAAAGAACTGCATTGATTGTGGCTGATTTTCTGAAGGCTGGAAACGTATCAAGCCCAGCTGATCTAAGATATCGAGAAGATTTGCTATTTCCTCGGAAGCTAATAGAAGATGCTGGAAACGTAAGAGTGGGTAGGGCTTTGCACAAGGCAATTAGGCCTTCAAAGCTTATTGAATTAAAACAAGTATTCCCTGGGGAGAAGTTTCTTTTAAATGGTGATAATAGGTGCATTGATATGGTGTTGGAGCAAGATGCTATTGGTGAAGATGCATTGAGAGGGTGGCTAGTTGCTGCATATGCTGTACAATTTGACAAGTCCTCTCATGAGCTCAGTAACAGTACCCTGCTGCAGGCCTATGAGAAAATGAATGAGGTGTTCCCTGTGTTTTTGAAAGAATTAGAGTGCAAAGGGTGGCATACAGATCGTTTTCTGGATGGAAGTGGGAGCCGCTTTGCATTCTAG 1290 0.4287 MDFMEKLKIWKKKTDKECEGPPVLWFETSVSVCRRFQFEPHGQLSVTTIGDSRPIYHKIVDSFLNKFFPSGYPYSVNEGYLRYTQFRALQHTASAALSVLSTQSLLFAAGLRPTPAQATAVSWILKDGMQHLGNLICSNLGARMDSEPKRWRILADVLYDIGTGLEVLSPLCPQLFLEMAGLGNFAKGMAVVASRATRLPIYSSFAKEGNLSDLFARGEAISTLFNVVGIGVGIQLASTVCASMQGKLVVGPLLSFIHIYSVTEEMRATPVNTLNPQRTALIVADFLKAGNVSSPADLRYREDLLFPRKLIEDAGNVRVGRALHKAIRPSKLIELKQVFPGEKFLLNGDNRCIDMVLEQDAIGEDALRGWLVAAYAVQFDKSSHELSNSTLLQAYEKMNEVFPVFLKELECKGWHTDRFLDGSGSRFAF 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01398 429 Pfam Vitamin B6 photo-protection and homoeostasis 58 289 IPR006968 -
Viun7g01398 429 PANTHER RUS1 FAMILY PROTEIN C16ORF58 23 428 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01398 Viun-Chr7 17689874 17697533 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01398 - - gmx:100814176 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01398 7 17689874 17697533 Viun7g01398 7 17689874 17697533 ECH
Viun1g02105 1 32403303 32407234 Viun7g01398 7 17689874 17697533 PCT