Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00250 ATGGAGAATCAAAATACAAAGGATAAAGTGTTTGAGAAGTTTACATGGACCATTATTACCAACTTCTCCACGTTAGACTCCAAAAAATTGTACTCGGATACCTTTTCTCTCGATGGCCACAAATGGAGGGTTGTTATATATCCAAAAGGGAATAAAGTGAAGTGTTTGTCAATTTATTTGAATGGTGGTGGTGTTGCTACTATGCCTCATGGATGGGAAAAATTTGCAAATTTCAAACTCATTCTCATTAATCAGTTCGACCACAAAATGAATGTAACGGGAGAAACTAGCCACACGTTCAATTCAAAGGAGGTTTCTTGGGGTTTCCCATCATTCATACCTTTGGATGAACTTCTTGACTCTAGTCGTGGGTTCCTGCTGAATGATAGTTGTATAATTGAAGTTCATATACTGGTTCAACAGTCAGAACATGAGAAAGAAGTTGATGAATCACTGAAGAATGTTGATAACAAGCTTGTTAAAGGCATTGAGAATGTTTCATCCAAGGAAATGATCTCAACCTCATCAATTGTTGAGATGGTGGATTTTAGGGGCATAGGAAAAGTAGAGAAACACTTTGTTCCTCTTCTCGAAGAAGTTTGTTCGCTATATCCCTCACTTATTCATAGTAAGCAGAAGAAAAGTCAAAGATTTACTGAATGGGCTTTTACCGCTCTGGGTAGAGTTCTTCATTTTCTCAATACTAAAAAGGTGAGAAACATGGATGATGAATCTTGCAATCATCTCCAAACTTTATGGGAGGAAGTTGAGACATTTGGATTTGATTTGGCTTGGTTAAAACCTCATGTTGAATCTGCCTTAGGCATGAAAACTCGTGTTGAGAAAGTTGTTGAAGTGAAAAGGTTGGAAGAGAATGTGATTACTTTGAAGGAGAATGTGGAAAGTTTGGAGGAGAATGTGACTACTTTAGAGGAGAAAACAAAGACTTTGAGGAGAAAGATAATTGAAGCAGAGGTAAATCTTGAAATGGCAAAAAGAGATCTGGAGAAAGCTAAAAAAGGATCCGAAGAGTGTGATTTGGACGTTGAACTGGGATATGGAAAATCATTATGA 1074 0.3724 MENQNTKDKVFEKFTWTIITNFSTLDSKKLYSDTFSLDGHKWRVVIYPKGNKVKCLSIYLNGGGVATMPHGWEKFANFKLILINQFDHKMNVTGETSHTFNSKEVSWGFPSFIPLDELLDSSRGFLLNDSCIIEVHILVQQSEHEKEVDESLKNVDNKLVKGIENVSSKEMISTSSIVEMVDFRGIGKVEKHFVPLLEEVCSLYPSLIHSKQKKSQRFTEWAFTALGRVLHFLNTKKVRNMDDESCNHLQTLWEEVETFGFDLAWLKPHVESALGMKTRVEKVVEVKRLEENVITLKENVESLEENVTTLEEKTKTLRRKIIEAEVNLEMAKRDLEKAKKGSEECDLDVELGYGKSL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00250 357 SMART math_3 14 118 IPR002083 GO:0005515
Viun7g00250 357 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 10 156 IPR008974 GO:0005515
Viun7g00250 357 SUPERFAMILY TRAF domain-like 13 141 - -
Viun7g00250 357 Coils Coil 286 341 - -
Viun7g00250 357 CDD MATH 13 137 IPR002083 GO:0005515
Viun7g00250 357 ProSiteProfiles MATH/TRAF domain profile. 12 137 IPR002083 GO:0005515
Viun7g00250 357 Pfam MATH domain 19 138 IPR002083 GO:0005515
Viun7g00250 357 PANTHER TRAF-LIKE SUPERFAMILY PROTEIN 11 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00250 Viun-Chr7 1765489 1766888 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00250 - - vra:106770048 454.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00250 7 1765489 1766888 Viun7g00250 7 1765489 1766888 ECH
Viun7g00250 7 1765489 1766888 Viun8g02512 8 34608322 34610891 ECH