Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02973 ATGGGAAAAAAACGTGTAATGTTGCCAGCCAAGGACGTTGACTTGTCCTCAGTTAAGTACCAACGTGAAATAGTTCAAGCTCCGCATTTGACTGGATTTATTTTTAGATTGTTTGTGAGGATACTAGAAGCTCCGCTGATCGGCCCTATCATAATTGATGTTTTGAAAAAGCAAAATAAAATTGAGGAGATATTGCAGCACACCGTGATACCTGAGGAGCCCATGTTTAAGCCTGAATATCCACCTCAAGAAGCGGAGTCTGGTGTTGTTGTCCTTGAAGAAGATGGGAGACCTGAAGATCGAGTTATGTCTGCCTTGCAGTGTCTTCCACATTATGATGTTGCTGAATTATGGGAAAGTTCACATGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCATGCTTTTCGATCTAGAAAAGTAACCCCATCCATGGTTGCTGAGCGCATCATCTCCATTATAGAGGAGAATGGAAGAAGTAAACCTCCTATACCACTGTTGATATCCTTTGTGGCTGCAGAAATCCGAGAGCAGGCCGCAGCATCTACTCAGAGGTTTGAAGCAGGAAATCCATTATCGATATTGGATGGAATTTTTATGGCCATCAAAGATGACATTGATTGTTATCCTCATCCATCTAAGGGTGCATCAACATGGATGCATGAGGTGCGCACTGTAAAGAAGGATGCAGTTTGTGTTTCAAAACTGCGTAGCTGCGGTGTCATATTCGTAGGGAAAGCAAATATGCATGAGTTTGGAATGGGCACAACAGGAAATAATCCTAATTATGGAACTGCAAGAAATCCTCATGCACCTGATAGGTATACTGGTGGGTCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGAATATGTTCTGCTGCATTGGGAACAGATGGTGGAGGTTCAATCCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACAACATATGGGCGGACAAGCATGGAAGGGTCATTATGTGATTCTGGGACTGTGGAAATTATTGGTCCCATTGCTTCATCAGTGGAGGACGTCATGCTAGTGTATGCGGCAATGTTGGGGGCATCACCAGCAAATAGAATCAGTTTAAGACCGTCACCACCTTGTTTGCCAACTCTGTCATCCAATGACTATTCAAATGCCTTGGGATCTTTAAGAATAGGGAAGTACACTCCGTGGTTTAACGACGTGCATTCAACTGAAATATCTGATAAATGCGAGGATGCACTTAATCTGCTGTCAAAGGAGCATGGTTGTGAAATGATAGAAATCGTTATACCGGAGCTTCTTGAGATGCGAACTGCTCATGTCGTTTCCATTGGCTCTGAATGCTTGTGTTCGCTGAATCCTGATTGTGCGGACGGGAAATGTGCAAAATTGGCATATGATACTCGGACAAGTTTGGCACTTTTTCGGTCATTTACAGCAGCAGATTATGTTGCTGCTCAATGTATTAGACGAAGGCATATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACCACTGGCATGACAGCACCCATAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAGACTACAGCTAACCTTATGCAGTTCGTTGTTCCTGCAAATCTTCTGGGGTTCCCTGCCATTTCTGTCCCGATTGGTTACGATAAAGAGGGACTTCCAATAGGTTTGCAAATAATGGGTGGACCATGGGCGGAAGCCACTATTCTGCGAGTAGCCTCTGCAGTTGAGAAACTCTGCGGCGAGTCGAAGAAAAAGCCCGCATCATATTATGACGTTCTGAAGGCCAACTGA 1824 0.4397 MGKKRVMLPAKDVDLSSVKYQREIVQAPHLTGFIFRLFVRILEAPLIGPIIIDVLKKQNKIEEILQHTVIPEEPMFKPEYPPQEAESGVVVLEEDGRPEDRVMSALQCLPHYDVAELWESSHASFRYWKIRDYAHAFRSRKVTPSMVAERIISIIEENGRSKPPIPLLISFVAAEIREQAAASTQRFEAGNPLSILDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSKLRSCGVIFVGKANMHEFGMGTTGNNPNYGTARNPHAPDRYTGGSSSGPAAIVASGICSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASSVEDVMLVYAAMLGASPANRISLRPSPPCLPTLSSNDYSNALGSLRIGKYTPWFNDVHSTEISDKCEDALNLLSKEHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCADGKCAKLAYDTRTSLALFRSFTAADYVAAQCIRRRHMYYHMEIFKKVDVIVTPTTGMTAPIIPPSALKSGETDMQTTANLMQFVVPANLLGFPAISVPIGYDKEGLPIGLQIMGGPWAEATILRVASAVEKLCGESKKKPASYYDVLKAN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02973 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Viun6g02973 607 PANTHER TRANSAMIDASE 122 604 IPR000120 GO:0003824
Viun6g02973 607 Pfam Amidase 168 580 IPR023631 -
Viun6g02973 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Viun6g02973 607 SUPERFAMILY Amidase signature (AS) enzymes 103 590 IPR036928 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02973 Viun-Chr6 32637653 32646251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02973 1 607 Acyl Lipid Metabolism Gene Families AT5G64440 67.763 0.0 871
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02973 - - gmx:100778732 1127.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02973 6 32637653 32646251 Viun6g02973 6 32637653 32646251 ECH