Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02956 ATGGCGGTGCAGTATGAGTGCTGTGATGTGGAGTTTTCAAAACGCGTACTGATAATTGTGGTGCTCGTGATGTTCGCTGGATTGATGTCAGGGCTCACTTTAGGCCTCATGTCCTTGAGTCTCGTTGATCTTGAGGTCCTTGCAAAGTCTGGAACCCCTCACGATCGCTACAATGCTGCAAGGATATTGCCTGTTGTCAGGAATCAACATTTGTTGCTTTGCACCCTTCTAATTTGCAACGCGGTAGCCATGGAGGCCCTTCCAGTTTTTCTGCATAGTCTCGTTGTTTGGTGGGGTGCTATACTGATTTCGGTGACATTAATTCTTCTGTTCGGTGAGATTATACCCCAATCAATCTGTTCTCGGTATGGTTTAGCAATTGGTGCAACAGTGGCTCCAGCTGTTCGTGTTCTTGTGTGGATATGTTTTCCTGTTGCTTATCCAATTAGCAAGTTGCTGGACTTTTTGCTGGGGACTCGACATAAAGCCCTTTTCCACAGAGCTGAGTTGAAGACACTTGTAAATCTGCATGGCCATGAGGCTGGAAAAGGTGGGGAATTGACACATCATGAAACAACAATCATTGCTGGAGCACTTGAACTCTCTGAGAAGATAGCTAGTGATGCCATGACTCTCTTAACCGAAACATTTTGTGTTGATATTAATTCAAAGCTTGATAGGTATCTGATGAATCTGATAATGGAGAATGGACATAGCAGAGTCCCTGTATATTATGAGCAGCCTACAAATATTATTGGACTTATCCTGGTAAAGAATTTATTGACAATTGATCCAGAAGATGAAGCACCAGTGAAAAGTGTGACCTTACGAAGAATTCCAAGGATTCCAGAATCGATGCCATTGTATGATATTTTGAATGAGTTCCAAAAGGGTCACAGCCACATGGCTGTCGTTGTTAAAAACTGGGACAAGACTGAGCAACAACCTTTCAACAATAGCGCCTATAATGTGAAGGTGAATATTGACGGTGATAAGCCTCACCATGAGAATAGTCTAAGAGCCAAATTGTCACACCATAAATGGAAAAGCTTTTCAAACTCAAATAATTCGAAGAGGGGTGGTTCCAAGAGCAGAAAGTGGTCAAAAAATGTGTACTCCGATATTTTGGATATAGATGGAAATTCTCTTCAAAAGCTGCCAGAAAAAGAAGAGGCTGTCGGAATAATTACAATGGAAGATGTCATCGAAGAGCTTTTACAGGAGGAGATATTTGATGAGACGGATCATGATTTTGAAGACTTGTGA 1266 0.4194 MAVQYECCDVEFSKRVLIIVVLVMFAGLMSGLTLGLMSLSLVDLEVLAKSGTPHDRYNAARILPVVRNQHLLLCTLLICNAVAMEALPVFLHSLVVWWGAILISVTLILLFGEIIPQSICSRYGLAIGATVAPAVRVLVWICFPVAYPISKLLDFLLGTRHKALFHRAELKTLVNLHGHEAGKGGELTHHETTIIAGALELSEKIASDAMTLLTETFCVDINSKLDRYLMNLIMENGHSRVPVYYEQPTNIIGLILVKNLLTIDPEDEAPVKSVTLRRIPRIPESMPLYDILNEFQKGHSHMAVVVKNWDKTEQQPFNNSAYNVKVNIDGDKPHHENSLRAKLSHHKWKSFSNSNNSKRGGSKSRKWSKNVYSDILDIDGNSLQKLPEKEEAVGIITMEDVIEELLQEEIFDETDHDFEDL 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02956 421 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
Viun6g02956 421 SUPERFAMILY CBS-domain pair 194 407 IPR046342 -
Viun6g02956 421 FunFam DUF21 domain-containing protein 189 324 - -
Viun6g02956 421 Pfam Cyclin M transmembrane N-terminal domain 17 185 IPR002550 -
Viun6g02956 421 Gene3D - 191 324 IPR046342 -
Viun6g02956 421 PANTHER METAL TRANSPORTER CNNM 3 416 IPR045095 GO:0010960
Viun6g02956 421 CDD CBS_pair_CorC_HlyC_assoc 206 306 IPR044751 -
Viun6g02956 421 Gene3D - 375 413 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02956 Viun-Chr6 32541919 32544668 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02956 K16302 - gmx:100799797 665.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02956 6 32541919 32544668 Viun6g02956 6 32541919 32544668 ECH
Viun3g01638 3 11326789 11331710 Viun6g02956 6 32541919 32544668 PCT