Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g02118 ATGTTCTCTTCACTTACGAAAACTCCACAACTCATTTCTTCACCATTTTACACGTTCCTTGCACCACACCAGAGGCTCCTCTCAAAAGGGTGCTGCAGACAATGGAGACATTCCATGTTTGTGAACGCAAAAACCCTTCTCAAAGATGGCATTCTCAGTGTAGATGGCAAGGATGCACTAAGGGGTGTGCCTGAAAATGTGGTGGTCACACCATTCACTGCTTCATCTGCTTTCATTGGAGCCTCTTGCGCTCATGCAAGTTCACGCCTTGTGTTCAAGCTTGGAGTTATCCAGAATGTCAGATTATTGTGCCTGTTCAGATTTAAAATTTGGTGGATGATACCTCGTGTGGGGAACTCCGGAAGGGACATTCCTGTTGAAACTCAGATGTTGCTTTTGGAAGCAAGAGAAAGAATGGATTCACAATCATCCAAGGAACAGAATTCATACATCATTTTCCTGCCAGTTCTAGATGGTGAATTTAGAAGCAGCTTGCAAGGAAATTCATCCAATGAACTTGAACTTTGCGTTGAAAGTGGAGACCCAGCAGTAGTTACATCCCAATCCCTAAATGCTGTTTTCATAAATTATGGAGACCATCCATTTGATCTAGTGAAGGAATCTATCAAGTTCTTATCAGAACACAGTGGTACCTTTTCACAGAGGGAAACCAAACAGATGCCAGGCATGTTAGATTGCTTTGGTTGGTGCACTTGGGATGCTTTTTATCACAGTGTTAATCCTCAGGGAATCAGGGATGGACTCAAAAGTTTATCTGAAGGAGGCACACCAGCAAAATTCTTGATAATAGATGATGGATGGCAAGACACTGTGAATGAGTTTCAAAAAGATGGGGAGCCATTTATTGAAGGATCACAATTTGGTGGCAGATTGATCAGCATCAAAGAAAATAATAAATTCCGAGCAATAGGAAATGTTGCTGAAAATGGGGCACCGATTAGTCTAAAGGATTTTGTTTCAGAAATCAAGAGCACTTTTGGTCTCAAATATGTCTATGTATGGCATGCCCTACTGGGTTACTGGGGAGGGTTAGATCCAAATGCATCAGGAACTAAGAAGTATGATCCAAAACTTAGATACCCAGTGCAGTCACCAGGGAATTTAGCAAATGCAAGGGATTTATCTATTGATGCCATGGAGAAGTATGGTATCGGTGTCATTGATCCAGCTAAAATTTCAGAGTTTTATGATGATCTACACAGTTATCTTGTCTCTCAAAACATTGATGGAGTTAAGGTTGATGTTCAGAACATACTGGAAACAATTTCAAGTGATCTGGGAGGACGTGTTTTTCTCACTAGACATTTTCAACAGGAGCTTGAAAAGTCCATATCAACCAATTTTCAGGACAATAGCATAATCTGCTGCATGGGTCATAGCACAGACTCTTTTTACCACTCAAAACAAAGTGCAATTACGCGAGCATCTGATGACTATTATCCAAAAAACCCCACAACTCAGTCTCTACATATAGCTGCTGTAGCTTTCAACAGCATATTCCTTGGTGAAATTGTTGTACCGGACTGGGACATGTTCTATAGTCTCCACGATGCAGCTGAGTTCCATGCAGCTGCTAGAGCAGTTGGAGGATGTGGAGTATATGTAAGTGACAAACCTGGTCAACATGATTTCAATGTATTGAAAAAGCTTGTACTTCCTGATGGATCAGTTCTCAGAGCCAGATACCCTGGGAGACCATCGCGTGATTGCTTATTTGTTGATCCAGTTATGGATAAAAAGAGCCTTCTCAAGATTTGGAACTTGAACAAATGTGGGGGAATCATAGGCATCTTTAATTGCCAAGGAGCAGGTTCTTGGCCTGGTCTTGAAAGTGAGGCTGAGGAAGACATTATTTTTGAGCTATCTGGCAAGGTTTCTCCCTCAGACATTGAGTATTTTGAAGAGGTTTCAGGAGGTCCATGGACTCAAGATTGTGCAGTTTTTCGCTTCAATACAGGATATCTGACACGACTATCAAAGGAAGAATCATTTGATGTCACATTAAAAGTATTGCAGTGTGAAGTATTCACAGTATCTCCTATAAAGGTTTATAATCAAACAATCCAGTTTGCACCAATAGGACTAACAAACATGTATAACTCTGGTGGAGCTGTTGAAGCAGTTGAATTCAGTGATTCTTCTGCATCAAAAATACACTTAAGGGGTAGAGGAGGAGGTGAATTTGGAGCTTACTCCAACTTAAGACCAAAGTCTTGCTGTGTAAATTCTGAAGATTTGGAGTTCAAATTTAGAGAGGAAGATAAACTTTTTGCAGTAACAATTCCAGCTAAAACCACTTCATGGAACATCACCATCTACTACTGA 2346 0.4075 MFSSLTKTPQLISSPFYTFLAPHQRLLSKGCCRQWRHSMFVNAKTLLKDGILSVDGKDALRGVPENVVVTPFTASSAFIGASCAHASSRLVFKLGVIQNVRLLCLFRFKIWWMIPRVGNSGRDIPVETQMLLLEARERMDSQSSKEQNSYIIFLPVLDGEFRSSLQGNSSNELELCVESGDPAVVTSQSLNAVFINYGDHPFDLVKESIKFLSEHSGTFSQRETKQMPGMLDCFGWCTWDAFYHSVNPQGIRDGLKSLSEGGTPAKFLIIDDGWQDTVNEFQKDGEPFIEGSQFGGRLISIKENNKFRAIGNVAENGAPISLKDFVSEIKSTFGLKYVYVWHALLGYWGGLDPNASGTKKYDPKLRYPVQSPGNLANARDLSIDAMEKYGIGVIDPAKISEFYDDLHSYLVSQNIDGVKVDVQNILETISSDLGGRVFLTRHFQQELEKSISTNFQDNSIICCMGHSTDSFYHSKQSAITRASDDYYPKNPTTQSLHIAAVAFNSIFLGEIVVPDWDMFYSLHDAAEFHAAARAVGGCGVYVSDKPGQHDFNVLKKLVLPDGSVLRARYPGRPSRDCLFVDPVMDKKSLLKIWNLNKCGGIIGIFNCQGAGSWPGLESEAEEDIIFELSGKVSPSDIEYFEEVSGGPWTQDCAVFRFNTGYLTRLSKEESFDVTLKVLQCEVFTVSPIKVYNQTIQFAPIGLTNMYNSGGAVEAVEFSDSSASKIHLRGRGGGEFGAYSNLRPKSCCVNSEDLEFKFREEDKLFAVTIPAKTTSWNITIYY 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g02118 781 SUPERFAMILY (Trans)glycosidases 230 558 IPR017853 -
Viun6g02118 781 Gene3D Aldolase class I 230 556 IPR013785 -
Viun6g02118 781 Pfam Raffinose synthase or seed imbibition protein Sip1 49 765 IPR008811 -
Viun6g02118 781 FunFam Uncharacterized protein 231 559 - -
Viun6g02118 781 PANTHER - 46 772 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g02118 Viun-Chr6 27256483 27261268 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g02118 39 779 Glycoside Hydrolase AT1G55740 47.480 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g02118 - - gmx:100819413 1414.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g02118 6 27256483 27261268 Viun6g02118 6 27256483 27261268 ECH