Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01881 ATGGATATTATGCGAGGAGATGGGATTTTCCCGGATGAGGTGGTCATTCAGATTCTGGCAAGGTTGCCTGTGAAGTCCCTTTTCAGGTTCAAAACCGTGTGCAAACTGTGGAATAGGTTGTCATTGGATAAGTATTTTGTTCAACTCTACAATGAGGTTTCTAGGAAGAACCCCATGATTCTGGTCGAGGTTTCTGATTCGTACGGGTCCAAATCTAGCTTAATATGTGTTGATAATTTAAGAGGTGTGTCTGAATTTTCACTGAGTTTCTTGAATGATAGAGTTAAGGTTCGAGCATCTTGTAATGGCTTGCTGTGTTGCTCTAGTATTCCTGATAAGGGTGTCTTCTATGTCTGCAATCCGGTCACTCGCGAGTACCGGTTGCTTCCCAAGAGTAGGGAAAGGCCTGTGACTCGGTTTTATCCGGATGGAGAGGCTACCTTGGTTGGCTTGGCTTGTGATGCTTCTTTTCAGAAGTTCAATGTTGTTCTAGCGGGTTACCATCGCACTTTTGGTCATAGACCAGATGGGAGTTTTATATGTTTGGTGTTTGATTCTGAGTTGAACAAGTGGAGGAAGTTTGTCTCATTACAAGATGACCATTTCACTCACATGAACAAGAACCAGGTTGTTTTTGTCAATAATGCTCTGCACTGGTTGACAGTTAGCTCTACTTATATACTTGTGCTTGATTTAAGTTGTGACGTTTGGAGGAAGATGGAGCTACCGTATGACTTGATTTATGGAAATGGTTATAGGATTTATCTCTTAGACTTTGATGGGTGCTTGTCTGTTATTAAAATTTCCGAAGCATGGATGAATATATGGGTGCTTAAAGATTACTGGAAGGATGAATGGTGTATGGTGGATAAGGTGAGTCTGAGGTGTATCAGAGGAATGGTGCCAGGCATTTTCCCGATCAGTCAGACAGGTGAATATGTTTTTTTGGCGACTCATAAGCAGATTTTGGTGTATCATTGCAAGAGTCAAGTTTGGAAAGAAATGTACTCTGTCAAGTATAGCTCAACACTTCCATTATGGTTTTCTGCTCATGCATATCGCAGCACTATGTTCTCATGCAACTGA 1086 0.4153 MDIMRGDGIFPDEVVIQILARLPVKSLFRFKTVCKLWNRLSLDKYFVQLYNEVSRKNPMILVEVSDSYGSKSSLICVDNLRGVSEFSLSFLNDRVKVRASCNGLLCCSSIPDKGVFYVCNPVTREYRLLPKSRERPVTRFYPDGEATLVGLACDASFQKFNVVLAGYHRTFGHRPDGSFICLVFDSELNKWRKFVSLQDDHFTHMNKNQVVFVNNALHWLTVSSTYILVLDLSCDVWRKMELPYDLIYGNGYRIYLLDFDGCLSVIKISEAWMNIWVLKDYWKDEWCMVDKVSLRCIRGMVPGIFPISQTGEYVFLATHKQILVYHCKSQVWKEMYSVKYSSTLPLWFSAHAYRSTMFSCN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01881 361 Pfam F-box-like 11 44 IPR001810 GO:0005515
Viun6g01881 361 Gene3D - 10 46 - -
Viun6g01881 361 SUPERFAMILY F-box domain 10 79 IPR036047 GO:0005515
Viun6g01881 361 ProSiteProfiles F-box domain profile. 10 53 IPR001810 GO:0005515
Viun6g01881 361 NCBIfam F-box protein interaction domain 100 329 IPR017451 -
Viun6g01881 361 CDD F-box_AtFBW1-like 10 46 - -
Viun6g01881 361 SMART fbox_2 10 50 IPR001810 GO:0005515
Viun6g01881 361 PANTHER BNACNNG10540D PROTEIN 10 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01881 Viun-Chr6 25828907 25830740 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01881 - - gmx:100811223 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01881 6 25828907 25830740 Viun6g01881 6 25828907 25830740 ECH