Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01778 ATGGGCGAGCATGAGGGTTGTGCACAACCACCAAGTGGGATATTGCCTAATGGCTTGCTGCCCAATGAGGCCGCATCGGTGATGCGAGTGCTTGACATGGAGCGATGGTTGAAGGCTGAGGAAAGGACCGCAGAGCTAATTGCCTGCATTCAGCCGAATCCGCCCTCCGAGGAGCGCCGCCATGCAGTTGCAGACTATGTGCAGCGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTACCCCTCAAAACTTATTTACCTGATGGAGATATTGATCTGACAGCATTCAGCAAGAACCAAACTCTGAAGGATGCGTGGGCACACCAGGTTCATGACATGCTCCAGAATGAGGAAAAGGATGAAAATGCAGAGTTTCATGTCAAAGAGGTTCAGTACATCCAGGCGGAAGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTGGTGGACATTTCATTTAACCAACTTGGAGGATTGTGCACACTTTGTTTTCTTGAGGAGGTTGATAATTTGATTAACCAAAACCATTTATTCAAGCGTAGCATTATACTTATAAAAGCCTGGTGTTACTATGAAAGTCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCTCTTGAGGTGTTGTATAGGTTTTTGGAGTTCTTTAGTAAGTTTGATTGGGATAATTTCTGTGTAAGTCTATGGGGTCCTGTACCCATCAGTTCACTTCCAGATGTGACAGCTGAACCTCCTCGGAAAGATGGTGGAGATTTATTGCTCAGCAAGTTATTTCTTGATGCCTGCAGTTCAGTTTATGCTGTTTTCCCTGCTGGCCAAGAAAATCAAGGGCAACCATTTACTTCCAAACATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGGCGTAGTGTCAGCAAAGGAAATTTCTTTAGAATTCGCAGTGCTTTTGCATTTGGGGCCAAAAGGCTCGCTAAATTGCTTGATTGCCCGAAGGAGGATTTGTTTTTGGAAGTTAATCAATTCTTTATGAACACTTGGGTCAGACATGGAACTGGGCAGCGACCTGATGCTTTGAGCAATGACTTATGGCGTTTGACGTTATCTAGTCATGACCAATCACGTGGGTCCGACAATCTCCTGAAAAATAGCAATAAAACTGAGAATACCTGTAATCATGAATTTCAAGTGAAAGGGGTGCATGCTTCACAGAGTGTTCTATCTCAACACAGTATATTGTCCTCTAAAAGTTTATCTAAGAGTAGTGGTGATTCTACAGCTAACCAAAATAATGCAAAGAATTTTGAACAGGTCAAAAGGGAAGCTAACTGCAATCAAGGTGCTCGGGTTGATAAAGGACAGAGAAATGCTAAACCAAAGAGTGCATTCAATGATGTCCCAGGAAGACTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTAACAGACTCTTACGGTGAAATTCCTAGGCAAGGAAGACATGCAAAAGCCCCAGAAAGTGGGAAAGGACCAACATCCTCTGCAACGTTGGAGAATAGTCACAGGAAGCATCTTGAATCTGACATGCCTGCTAGTTATACTGTTAGAATTGATGATTCATCTGGTAGGAAAATAATCTCACATCAGGTTCCTGACAGCGGTGCTGATTCAAACAATGGCTCAAATAGTTATGATAATGAGTCTGGCCACGGCATTGTGGGTGAGGAGTTTGCTTCTGTTGCTGGAGTAGGTGGAACGCATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATGACATCGCCCACAACTGAAGGTTTCAGTGGTCAGAATCAAATACCAGTGAATTTAGCACCAGGTCACATACCACTTCCACTTTCCCCTTCCATTCTTGCATCAATGGGATATGCTCATAGGAACGTGGGTAACATTCCCTTAATTGAGTCCTTCAATTGGGGTACTAATGTGCAATTTCCCCAAGGTTTAGTCCCTTCCCCATGGACTCCATATTTTCCTGGCATGGGATTGACCTCAAATCCTGAAGATTTAATCGAAACTGGTAATGAGAATTTCAATACTGTTGAAATGGGTCCAGCAGAAGCTGATAAAGATTTTTGGCATGAGCAAGAAAGGGCTGCTGCTGGGGGGATTGATGTTGATAATGTAAATTTTGAAATGGTTCCAGATGATAAGCGACAGTCTACTTCTGGTGGTTATAACTTTATACCATCATCTCATGTTGGCAGCTCTAGTAATTCTGCTATACTTCAGCCAACATTTACTAAAGAAAATCGAGTTTCTACAAAAGAAGAGCACATTGATAGTCCTAAATATCAAGATGGCAGAGGAAATGGTGCATATTTTGATGAAAGAATTGCAAATCCTAGGTTGCCCAGTGAACCATCTTCAAGCTCATTCAGGAGTAAGACGTCTTCAGAAAGCTCTTGGGAGGGACCATCTCCAAAATCTTCAAAATCAACTAGGGAAAAAAGAGGGAAGAAAAATACTTCCTCAGTGACATCGGCTGCTTACGGTAAGGGCAAGAATGTCTCAGATATTTCCTCTAATCTTGTGGATGATGAAAACAGACAATGGACACCTCTGTCAACTACAACATCTGATATGTCAGATAGAAGCAGTGGGCCACTTGCTGTTGCTCCTATGCATGTTCCAAGGCAGCCAGTGTCTGGTTCTGAAGTGGTTCGGACAAGTGGATCAGATTCTGTGTCACCCATGGCTCCAATGCTTATAGGTCATGGTTCTCGCCAAAGAACAGGGGATAATTCTGGGGTTGTTCCATTTGCGTTCTATCCCACAGGTCCACCAGTACCATTTGTTACCATGCTTCCATTATATAATTTTCCTACTACTCAATCTTCTCACACACCAGCAAGCAATTTCCATGTGGAAGATGCAGATAACAATGACCGTGGTCAGAGTTTTGATCCATCTGAGGTGCATGATCTGCCTGAGGTGTTGAGCTCTTCCAATTCTATGGGAAGAGCTGCTATTGACACAGTAGAGCCCAAGCTTGACATTCTTAATGGTGACTTTGTTAGCCATTGGCAAAATTTGCAGTATGGGCGAATTTGTCAAAATTCACGCCATCCTGATTCGGTTAACTATCCTTCATCTGTTGTGGTACCTCCTGTTTATTTGCAGAGTCGTTTTCCCTGGGATGGTCCTGGAAGACCACAGTCAGCTAATGTGAATCTTTTCACTCAGCTTATGAACTATGGGCCACACCTAGTGCCTGTTGCTCCTCTCCATTCAGTTTCCAACAGACCAGCCAATATTTACCAACGATTCATAGATGAGATACCACGGTATCGAAGTGGGACAGGAACCTACCTGCCAAATCCTGTTTCTGTTCGGGATCGACATTCTACAAGCACCAGAAGGGGTAATCACAACTATGACAGAAGTGATCAGCATGGTGACAGAGAAGGGAATTGGAATGTTAACTCAAAGTCGAGAACAAGTGGGCGTAGCCATTACCGCAGTCAAGCTGAGAGATCTAGCTCAAGGCCAGAAAAGTTGGCAACGAGTGAGAGCCATTCTGAAAGACCATGGGGTTCACATAGACCTGATTCTTTTGTTTCGCACCAGAGTGGTCCTGTCCGGTTAAATTCCTCACAGAGCAATCTATCAAATTTGGCTTATGGAATGTACTCTCTACCGGGCTTGCGCCCCAGTGGGATATCATCAAATGGACCAACAATTCCACCTGTTGTAATGTGGTATTCATATGATCATAATGCTGGCTACAGCACACCCGCGGAACAGCTCGAATTTGGAACTCTAGGACCTATGGGTTTCCCTGGTGTCAATGAAGTTTCATTGATCAATGAGGGAAGCCAACCTGGTGGAGCTTTTGAGGAGCAAAGGTTTAATGGTGGCACTGCTCAACAATCGTCACCTGATCAACCTGCTTCACCCAAGTTCCGAAGGGGGCTTTGA 4008 0.4366 MGEHEGCAQPPSGILPNGLLPNEAASVMRVLDMERWLKAEERTAELIACIQPNPPSEERRHAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQTLKDAWAHQVHDMLQNEEKDENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPAGQENQGQPFTSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLAKLLDCPKEDLFLEVNQFFMNTWVRHGTGQRPDALSNDLWRLTLSSHDQSRGSDNLLKNSNKTENTCNHEFQVKGVHASQSVLSQHSILSSKSLSKSSGDSTANQNNAKNFEQVKREANCNQGARVDKGQRNAKPKSAFNDVPGRLLFARTCSSPELTDSYGEIPRQGRHAKAPESGKGPTSSATLENSHRKHLESDMPASYTVRIDDSSGRKIISHQVPDSGADSNNGSNSYDNESGHGIVGEEFASVAGVGGTHMMHQEEQDLLNMMTSPTTEGFSGQNQIPVNLAPGHIPLPLSPSILASMGYAHRNVGNIPLIESFNWGTNVQFPQGLVPSPWTPYFPGMGLTSNPEDLIETGNENFNTVEMGPAEADKDFWHEQERAAAGGIDVDNVNFEMVPDDKRQSTSGGYNFIPSSHVGSSSNSAILQPTFTKENRVSTKEEHIDSPKYQDGRGNGAYFDERIANPRLPSEPSSSSFRSKTSSESSWEGPSPKSSKSTREKRGKKNTSSVTSAAYGKGKNVSDISSNLVDDENRQWTPLSTTTSDMSDRSSGPLAVAPMHVPRQPVSGSEVVRTSGSDSVSPMAPMLIGHGSRQRTGDNSGVVPFAFYPTGPPVPFVTMLPLYNFPTTQSSHTPASNFHVEDADNNDRGQSFDPSEVHDLPEVLSSSNSMGRAAIDTVEPKLDILNGDFVSHWQNLQYGRICQNSRHPDSVNYPSSVVVPPVYLQSRFPWDGPGRPQSANVNLFTQLMNYGPHLVPVAPLHSVSNRPANIYQRFIDEIPRYRSGTGTYLPNPVSVRDRHSTSTRRGNHNYDRSDQHGDREGNWNVNSKSRTSGRSHYRSQAERSSSRPEKLATSESHSERPWGSHRPDSFVSHQSGPVRLNSSQSNLSNLAYGMYSLPGLRPSGISSNGPTIPPVVMWYSYDHNAGYSTPAEQLEFGTLGPMGFPGVNEVSLINEGSQPGGAFEEQRFNGGTAQQSSPDQPASPKFRRGL 1335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01778 1335 MobiDBLite consensus disorder prediction 436 463 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 986 1000 - -
Viun6g01778 1335 Gene3D - 162 358 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 975 1010 - -
Viun6g01778 1335 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 1143 1168 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 780 794 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 503 585 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 436 485 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 1301 1335 - -
Viun6g01778 1335 SUPERFAMILY Nucleotidyltransferase 21 201 IPR043519 -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 744 927 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 852 895 - -
Viun6g01778 1335 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Viun6g01778 1335 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 1180 1211 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 744 779 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 1130 1229 - -
Viun6g01778 1335 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 16 1329 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 1213 1229 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 813 838 - -
Viun6g01778 1335 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Viun6g01778 1335 CDD NT_PAP_TUTase 59 166 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 566 583 - -
Viun6g01778 1335 MobiDBLite consensus disorder prediction 1313 1327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01778 Viun-Chr6 25048428 25055704 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01778 - - gmx:100809742 1883.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01778 6 25048428 25055704 Viun10g02135 10 36263065 36270763 PCT