Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01714 ATGACATTGCTTTTTCCTTGTTTTGCTGGATATATGGCTAATCATTCTTTAGTTTTAGACAACACATCTGTTAGTACTGTTACTGTAGCAGAGCAGCCATTAGTCATTGGGCAAGAGTTTCCAGATGTGGAAACCTGCCGAAGAACACTGAAAGATATTGCCATTGCTATGCATTTTGATCTTCGGATAGTTAAGTCTGATCGCAGTCGTTTTATAGCAAAATGCTCCAAAGAAGGGTGCCCATGGCGTGTCCATGTTGCAAAGTGTCCTGGTGTTCCAACTTTTACTGTAAGAACACTACAAGGAGAGCATACTTGTGAGGGAGTTCAGAATCTTCATCATCAGCAGGCATCAGTAGGTTGGGTTGCAAGATCTGTTGAAGCACGCATTCGAGATAATCCACAATACAAACCAAGGGAAATACTGCAAGATATTCGTGATCAGCATGGAGTTGCTGTTTCTTACATGCAAGCTTGGCGGGGGAAGGAACGTAGCATGGCTGCCCTTCATGGGACATTTGAAGAGGGTTACCGTCTTCTCCCTGCTTACTGCGAACAAATAAGGAAAACCAACCCTGGTAGCATTGCATCTGTTGTTGCCACTGGACAAGAAAATTGTTTTCAAAGACTGTTTATTTCTTATCGTGCATCAATTTATGGGTTTATAAATGCTTGTAGGCCACTTGTAGAACTTGACCGAGCACATCTTAAAGGAAAGTACCTAGGTACACTGCTTTGTGCTGCAGCTGTTGATGCAGATGATGCGCTGTTTCCTTTGGCTATTGCTGTTGTTGATACTGAAAGTGATGATAATTGGATGTGGTTCATGTCAGAGTTACGCAAACTTCTAGGAGTGAACACAGAAAACATGCCTAGGCTGACAATACTATCTGAAAGGCAAAGAGGCTTGGTGGAGGCGGTAGAAACACATTTTCCCAGTGCTTCACACGGTTTCTGTCTGCGTTTTGTCAGTGAAAATTTTCGTGATACATTTAAAAACACAAAGTTGGTAAACATCTTTTGGAATGCTGTTTATGCGCTTACTGCTGCTGAATTTGAAAGCAAGATTACTGAGATGATGGAAATTTCACAAGACGTTATATCATGGTTTCAACAATTTCCTCCCTATCTTTGGGCTGTGGCATACTTTGATGGTGTTCGATATGGCCATTTCACACTTGGAGTAACAGAATTATTGTATAACTGGGCCCTTGAATGTCATGAGCTCCCTATAGTTCAGATGATGGAACACATCCGCCAGCAGATGGTATCTTGGTTTAGTGATCGGCAGGATATGGGCATGAGGTGTACATCAATTCTTGTACCATCAGCGGAGAAGCGAATTTTGGAGGCAATTGCCGATGCTCATTGCTATCAAGTTCTCCGGGCAAATGAAGTTGAGTTTGAAATTGTGTCCACTGAGAGGACCAATATTGTAGATATACGGAGTCGTGAGTGCTCTTGTCGCCGTTGGCAGCTGTATGGATTACCTTGTGCCCATGCTGCTGCTGCACTTATCTCTTGTGGACACAATGCCCATATGTTTGCTGAACCATGCTTCACTGTACAGAGTTACAGAATGACCTACTCTCAGATGATTAATCCTATACCAGATAAGAGCCAATGGAGAGATCAGGGAGAAGGAGCTGAAGGTGGAGGAGGGGCAAGGGTTGATATTATAATCCACCCACCAAAGACTCGCCGGCCACCTGGGAGGCCTAAAAAGAAGGTTCTACGAGTGGAGAATTTTAAGCGTCCCAAAAGAGTTGTCCAATGTGGCCGCTGTCACATGTTAGGACATTCTCAAAAGAAATGCACAATGCCCATTTGA 1830 0.4339 MTLLFPCFAGYMANHSLVLDNTSVSTVTVAEQPLVIGQEFPDVETCRRTLKDIAIAMHFDLRIVKSDRSRFIAKCSKEGCPWRVHVAKCPGVPTFTVRTLQGEHTCEGVQNLHHQQASVGWVARSVEARIRDNPQYKPREILQDIRDQHGVAVSYMQAWRGKERSMAALHGTFEEGYRLLPAYCEQIRKTNPGSIASVVATGQENCFQRLFISYRASIYGFINACRPLVELDRAHLKGKYLGTLLCAAAVDADDALFPLAIAVVDTESDDNWMWFMSELRKLLGVNTENMPRLTILSERQRGLVEAVETHFPSASHGFCLRFVSENFRDTFKNTKLVNIFWNAVYALTAAEFESKITEMMEISQDVISWFQQFPPYLWAVAYFDGVRYGHFTLGVTELLYNWALECHELPIVQMMEHIRQQMVSWFSDRQDMGMRCTSILVPSAEKRILEAIADAHCYQVLRANEVEFEIVSTERTNIVDIRSRECSCRRWQLYGLPCAHAAAALISCGHNAHMFAEPCFTVQSYRMTYSQMINPIPDKSQWRDQGEGAEGGGGARVDIIIHPPKTRRPPGRPKKKVLRVENFKRPKRVVQCGRCHMLGHSQKKCTMPI 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01714 609 Pfam MuDR family transposase 34 97 IPR004332 -
Viun6g01714 609 ProSiteProfiles Zinc finger SWIM-type profile. 468 509 IPR007527 GO:0008270
Viun6g01714 609 PANTHER POLYPROTEIN, PUTATIVE-RELATED 33 577 - -
Viun6g01714 609 Pfam MULE transposase domain 229 325 IPR018289 -
Viun6g01714 609 Pfam SWIM zinc finger 475 508 IPR007527 GO:0008270
Viun6g01714 609 SMART 26again6 484 511 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01714 Viun-Chr6 24755032 24764360 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01714 - - gmx:100808214 1187.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01714 6 24755032 24764360 Viun6g01714 6 24755032 24764360 ECH