Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01669 ATGAGGTGCTTTCTACCATGTTTTCGCTCTTCAAAACGTCGCAACCAATTGCGTTCTAAGGATGCAACTCCCACACAAACCCATGTTGGGGAAGGAGCTGTTGAACCTCTTGCTCGACAGAAGACTGGTGTTGAAGAACTCATCGATTGCATAGCAGAATCAAAAATTAAAAATGAAGAGCAATCAAATAATAACAGCGTTGAAACCAAGGAGGAGAGGGAAGGGGAAGCACTGAAGATAGATGAGAAGAAGGATAACGATGAAAGAGATGAGAGATTGCATCAGGAGGAGTCTTCCGAGTCACTGTTCTCTCTGTCTGTTTGTTCCAGAAAAAAAGTTTCAGATGCGGAAACAGTGGAGCCAGAAGTTAATAGTCCAGTACAACTGGTATTATGCACAAGAGAGGTACTTGAAGCATTTGGGTCATCCCCAAATGCACCACTTCAAAAAGCTTCGTCCGTTCTGAGTCCAGTAGAAGAATTTACCCATGAAAATCCACCCAAGGAGAAGGACGAAGAGGAAGGAGAAGAAGGGAAAGTGAGTCACTCTATTCTACAGTATAGGTATAGAGATTGCCCAGATGAGGAATACGATGAGGTTAATTTAGATACAAGTGATTTGGATTCTACGCTGGAAAATGAGGATCCTCAGAGTGAGAAGAGAGAAAAGGGGGAAGAAGGCGCTGCTTTTGTTAAACGGACATGGGTTGAAGAAGAGTCTTCGGAATCTCTGTTTTCTCTGTCTGCCGATTCAAGACTACGAATTTCATCAGCTGAAGCAGAGAATGAAGTGGACAGTCTAGTAGTGTCAGGCAATGGTGCAAACCGCATGACAGAAAAAGAAGAACAAGATGCTTCCACAGTGGTGAATCGAATAGAGAAAGTTACGAAAGGAAGAGTGAAGATGGATAAAGAAAACATGAAGGTGGTAGTGGAAGATGGTAACATAGCTGTTAGTCCAGAGCGTACTGTGAAGCTGTCAAAGCAGAAGGGTAGGCAAGAAATTGGGGTAGAGACCAGCCTCTCGAGCTGGTTGGTTGAATCGGAAAGCACGCCGGTTTCCATTAATAGTAACAGTTGTGTGGGAGAACATACACCAAAAGGGAGAAGAGGTTCACCGTGGAGTCATGAGGATAGGCCAATTTTGGGAGCATTAACAGTTGAAGAGATTAGGATGTATTCTTTATCTGCATCTTCGAGAAGGTCTAGAAGCCGGAGTCCGGACGAGACACCCATTATAGGTACTGTTGGAAGCTACTGGACTCACACACAACAGACCATGGATTTGCAATTCAACACAAAACGGAAGGATGTAACACCAAAGAGGAGTACAACGGCATTACAAACAAGACTAGAAGGTGCATTTGATGCTAGTGTATCAATGGGTTCAACGGCGTGA 1398 0.4392 MRCFLPCFRSSKRRNQLRSKDATPTQTHVGEGAVEPLARQKTGVEELIDCIAESKIKNEEQSNNNSVETKEEREGEALKIDEKKDNDERDERLHQEESSESLFSLSVCSRKKVSDAETVEPEVNSPVQLVLCTREVLEAFGSSPNAPLQKASSVLSPVEEFTHENPPKEKDEEEGEEGKVSHSILQYRYRDCPDEEYDEVNLDTSDLDSTLENEDPQSEKREKGEEGAAFVKRTWVEEESSESLFSLSADSRLRISSAEAENEVDSLVVSGNGANRMTEKEEQDASTVVNRIEKVTKGRVKMDKENMKVVVEDGNIAVSPERTVKLSKQKGRQEIGVETSLSSWLVESESTPVSINSNSCVGEHTPKGRRGSPWSHEDRPILGALTVEEIRMYSLSASSRRSRSRSPDETPIIGTVGSYWTHTQQTMDLQFNTKRKDVTPKRSTTALQTRLEGAFDASVSMGSTA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01669 465 MobiDBLite consensus disorder prediction 12 40 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 353 378 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 64 98 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 196 212 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 141 228 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 162 195 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 145 159 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 213 228 - -
Viun6g01669 465 PANTHER ASPARTYL/GLUTAMYL-TRNA(ASN/GLN) AMIDOTRANSFERASE SUBUNIT 166 426 IPR039300 GO:0007142
Viun6g01669 465 MobiDBLite consensus disorder prediction 58 104 - -
Viun6g01669 465 MobiDBLite consensus disorder prediction 396 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01669 Viun-Chr6 24376946 24379070 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01669 - - pvu:PHAVU_006G104900g 579.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01285 7 14881177 14883132 Viun6g01669 6 24376946 24379070 ECH
Viun1g02146 1 32735910 32737803 Viun6g01669 6 24376946 24379070 ECH
Viun6g01669 6 24376946 24379070 Viun6g01669 6 24376946 24379070 ECH
Viun6g01669 6 24376946 24379070 Viun7g01285 7 14881177 14883132 PCT