Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01378 ATGGCGTCGTGGTGGTGCCCTTCTCCCTCCGCCACCCTCGCTGTACCCACCACCGTCACCACCACCGCTCGCCGCCACTCCATCACTTCCCAATTTCGCATCCAAACCCTCACATTCCCCCCCTCTTCCTGTCGTCATTCCACCGCTGCTCCACCTTCTCTCCGGTTTAGGGTTCCATGCTCCAACAAAACCGCCTTGCCGGATTCTCCGGCGCTGCCTCCGGACGAGGTGGATTGCGTGGGAACCGGACAAGACGTGGAGTGCCTCGTGAACACGGAAAAGACAGAATTGGAAACACTTTCGTCTTCATCGTCGATGCCCTGCCTCGCAGAAGCGCTGTGGGAATGGACGGTGTTGGTTTCGCCATTCTTTTTCTGGGGCACGGCCATGGTGGCGATGAAAGAGGTGCTTCCCAAATATGGGCCGTTTTTCGTTTCCGCTTTTCGCCTCATTCCTGCGGGGTTTCTTCTCGTGGGTTTCGCGGCTTCGAGAGGAAAGTCTCTTCCGTCTGGTTTCAATGCTTGGCTTTCCATCACACTTTTCGCCCTCGTTGATGCCACTTGCTTTCAGGGTTTTCTCGCAGAAGGATTGCAGAGGACATCAGCTGGTTTAGGAAGCGTTATAATTGATTCACAGCCTTTGACTGTGGCTGTACTTGCGGCTTTGTTATTTGGGGAGTCAATTGGAGTTGTTGGAGCTGCTGGGCTTGTACTTGGTGTCATTGGACTTGTACTACTCGAGCTACCCGCCCTATCATTTGATGAAAGCAACTTCTCATTGTGGGGAAGTGGTGAGTGGTGGATGCTTCTTGCAGCTCAGAGTATGGCAGTTGGCACAGTCATGGTCCGGTGGGTTTCCAAGTACTCTGATTCTGTCATGGCAACTGGATGGCATATGATTCTTGGTGGTCTCCCACTTCTGGTATTCTCAGTTCTTAACAATGACCCTGCGGTGAGTGGGAGTCTCAAAGAGTACACTTCACCTGACATATTGGCACTCCTCTATACATCTGTTTTTGGAAGTGCTGTCAGCTATGGCGTCTTTTACAGTGCAACTAAAGGCAGCTTGACCAAGCTCAGTTCACTCACGTTTTTAACTCCAATGTTTGCTTCAATTTTTGGGTTTCTCTATCTTGGCGAGACCTTCTCTCCTGTACAACTAGTTGGGGCCTTGGTCACTGTGGCTGGAATATACATGGTTAACTTCAGAAACACTGCTGAATGA 1224 0.5123 MASWWCPSPSATLAVPTTVTTTARRHSITSQFRIQTLTFPPSSCRHSTAAPPSLRFRVPCSNKTALPDSPALPPDEVDCVGTGQDVECLVNTEKTELETLSSSSSMPCLAEALWEWTVLVSPFFFWGTAMVAMKEVLPKYGPFFVSAFRLIPAGFLLVGFAASRGKSLPSGFNAWLSITLFALVDATCFQGFLAEGLQRTSAGLGSVIIDSQPLTVAVLAALLFGESIGVVGAAGLVLGVIGLVLLELPALSFDESNFSLWGSGEWWMLLAAQSMAVGTVMVRWVSKYSDSVMATGWHMILGGLPLLVFSVLNNDPAVSGSLKEYTSPDILALLYTSVFGSAVSYGVFXYSATKGSLTKLSSLTFLTPMFASIFGFLYLGETFSPVQLVGALVTVAGIYMVNFRNTAE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01378 408 Pfam EamA-like transporter family 116 246 IPR000620 GO:0016020
Viun6g01378 408 Pfam EamA-like transporter family 263 403 IPR000620 GO:0016020
Viun6g01378 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 297 405 - -
Viun6g01378 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 249 - -
Viun6g01378 408 PANTHER INNER MEMBRANE TRANSPORTER 103 407 - -
Viun6g01378 408 Coils Coil 404 408 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01378 - - var:108341119 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01378 6 22501149 22505073 Viun6g01378 6 22501149 22505073 ECH