Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g01019 ATGATGGCTTCCCCAAACAACCACCACCCCAACCCCAACGCCCACCCTCCTCCGCCCTTCGACATGCACTCCTTCTTCAATCCTCCGCCCCCTTCTTCCAACCCTAACCCTAACCCTAGCCAATCATCCCAATACCCTCCGCCCTTCCCCGCCGCCGCGCCCTTCCCCTTCCCGGCCTTCGACCTCCCTCTCCACCACCACCGTTCCCTCTCCTTCCCCACGCAGCCCATCCCTCCGCCCTCCAACCCCAACGCCGGTGCTCGCCTCATGGCCCTCCTTAGCAACCCCTCCCCCCCGCTCCCCGACTTCGCGGTTCCCTCCTCCTCCCCCTCCACCGTCCTCGCCGCCGCCACTGCTGCTGCCGCAGCCCTCACTCGACTGCCCAGCGGCAAGGTCCCCAAGGGAAGGCACCTCTCCGGGGAGCGCGTATCCTACGACGTGGACGTCCGGCTGCCTGGCGAGATCCAGCCGCAGCTGGAAGTTGCTCCGATCACGAAATATGGGTCGGATCCTAACCCGGTTTTGGGGAGGCAGATTGCGGTGAATAAGTCGTATATATGCTATGGGCTGAAACAGGGGAACATTAGGGTGCTTAATATCCACACTGCTGTCAGGTCTCTCCTCAGAGGCCACACTCAGAGGGTCACAGACTTGGCGTTTTTTGCTGAAGATGTTCATCTCTTGGCTAGTGTTGGCACAGATGGCCGTGTCTACGTGTGGAAGATCTCTGAAGGTCCAGATGATGAAGATAAGCTTCAAATTACAGCCAATATTGTTATTGCTATTCAAATAGTGGGGGAGGAGAAAGTTGAACATCCTCAAATTTGCTGGCACTGTCACAAACAAGAGATTTTGATAGTTGGTATGGGAAAACATGTTTTTAGAATTGACACCACAAAGGTTGGAAATGGTGAAGCGGTTGTGGCAGAGGATCCTCCTCTGAGATGTCCTGTTGACAAGCTCATTGATGGGGTTCAGCTGGTAGGCACACATGATGGAGAGGTGACTGATTTATCCATGTGCCAATGGATGACCAATCGATTGGTATCTGCATCACAGGATGGCACGATAAAGATCTGGGAAGATCGCAAGACACAGCCACTTGAAGTTTTGAGACCACATGATGGACATCCAGTTTTTTCTGCTACATTTTTTACTGCTCCTCACCAGCCTGATCATATTGTTCTTATCACAGCTGGACCACAAAATAGGGAGGTGAAGCTATGGGTATCAGCAAGTGAAGAAGGTTTTCTGCTCCCAAGTGACACCGAATCCTGGAAATGCACTCAGACGTTGGAGTTGAAGAGTTCAGCTCAACCATCTAGAGATGCTTTCTTTAATCAAGTTGCAGCATTGCCTCATGCAGGTCTACTTTTACTTGCAAATGCCCAGAGGAATGCTATATATGCTGTACATTTAGAATATGGTCCTAATCCAGAATCAACACGCATGGATTATATTGCTGAGTTTACTGTGACCATGCCCATTCTGAGTTTTACTGGGACAAGTGATATACTGCCTCATGGTGAACATATAGTTCAGGTTTATTGTGTCCAGACACAGGCTATTCAGCAATATGCTTTGGATTTAGCCCAGTGCTTGCCTCCACCACTGGATAACGTGGGACTAGAGAAGTCAGATTCCGTTGTTTCCGCTGATGCAATTACTGTTGAAGGATTCCACACGTTAGACTCTTCTGCTCCCAAAATAATGTTACAAGCAGGTAGTACTGAAAATGGACTCGGACCTAGATACCCTTTAAGCTCTGGCCATGTTGAGGCGCCTATTTCAAGTTCAAACACTGAAGCTAAGCCTGTTACATTAGCTCCTTCTAGTGGCGAACCTGATATCGTTTGTATTCCATCTCCACCTCTTCCTTTAAGCCCAAGGTTATCTAGGAAACTCTCTGATATCAGGAATCTACAGTCAAATTTGGGTGATCATGTTGGGGAACATCCTGTTAATGATTATTCTGTAGACAGACAAATGGATACCATTCACAGGAACCTCTCTGAGACATTTAATAGTGAGTCAAAGAATGATGAAAAGAAAGTGAAGCAGGATCACATTTCTAGTGTACTTAATCCTTCTGTCATGTTTAAGCAACCAACCCATCTAATCACACCATCTGAGATCACAAAGGCTGGTTCCTCTGAGAATAATATAATTGATGGGAAGAGCGAGGGAGAAGGAAAGATGCAGGATGTGGGTAATGCTGAAGTGGAAGTGAAGGTGGTGGGTGAGACAATATCTAATCAAATTGATGAATTTGGTAGGCAAGGGTCACAACAAAATCCAGTTTCTGATAGTAAAGAAAAAATATTTTGTTCTCAGGCCTCAGATCTTGGCATTGAGATGGCTCGAGAAGGCTGTGTGATAACTGCTGGGGACACATACCTTACAGAGGAACCTGGACAACTTGATTCAACAGGAGCGGTGTCACTATCTCAACCTCCTGATACTGGTGAGGATGGACTCCAAGATATGGCAAAAGATGCCCATGAAAAGGTTTCTGACTCATCTACATCTGTGGCAGTGCCGCCATCTCCTGTCCCTAATGCTAAAGGGAAAAGACAGAAGGGTAAAAATTCTCAAGCATCAGGTCTATCTTCCTCATCTCCAAGTGTGTGTAATTCAACTGATTCATCCAATGAACCGAATGGAAATTCTAGCCTTCCGTCTGCTGAAAATGCTTTCCCTCAAATTCTGGCAATGCAAGAGTCAATCAATCAGTTATTGACAATGCAAAAAGAGATGCAAAAGCAAATGACAATGATGGTCGCTGTTCCAGTGACAAAAGAAGGTAGAAGGCTTGAGGCTGCCCTAGGGAGAAACATGGAAAAGGCTGTCAAGGCCAATAGTGATGCTTTATGGGCTAGAATCCAGGAGGAGAATGCAAAAAATGAAAAGTTGTTACGAGACCGTATCCAGCAAATTACAGGTTTGATTAGTAACTTTATGAATAAAGATCTACCGGCAATACTGGAGAAAACAGTAAAGAAGGAAATGGCCTCGGTCGGGCAAGCAGTAGTACGTGCAATGTCTCCTGCTGTGGAGAAAATAATATCTTCTGCTATTGTTGAATCCTTCCAGAGAGGAGTGGGTGATAAGGCAGTGAACCAACTTGATAAATCAGTTAGTTCAAAACTGGAAGCTACTGTAGCTAGGCAAATCCAAGCACAGTTTCAGACAACTGGCAAACAGGTGCTTCAGGAGGCACTCAAATCCAGTTTTGAAACATCAGCGGTTCCTGCCTTTGAAATGTCGTGTAAAGCCATGTTTGAGCAAGTGGATGCTACATTTCAGAAAGGCATGGCTGAACATTCCGCTGCTGTGCAGCAACGACTTGAATCTGCGCCCACTTCTTTGGCAATGACGCTAAGGGATTCCATTAATTCGGCATCATCAATTTCTCAAACTTTGAGTAGAGAAGTGCTTGAGGGCCAGAGAAAGTTAGTAGCACTCGCGGCTACAAGAACAAACTCTGGCACGTTAAATCCTATGCCGGTCCAGCTGAACAATGGTCCTTTACTTCGTGAAAAGGTTGAGGTTCCCCTGGATCCCACACAGGAGCTAGCAAGGTTGATTTCTGAACGGAAATTCGAGGAGGCTTTCATTGGAGCCCTACATAGAAGTGATGTATCCATTGTATCATGGTTATGTTCTCAGGTTGATTTACATGGACTGTTGGCAATGGCTCCTCTTCCTTTAAGTCAAGGTGTACTGCTCTCACTTCTGCAGCAACTAGCCTGTGACATTAACAACGACACATCACGAAAGATCGCATGGTTAACAGATGTGGCTTCTGCCATAAACCCATCGGACCCAGTGATTGCGATGCACACACGGCCCATCTTTGAGCAAGTCTTCCAGATACTCAATCATCAACGTAGCTTGCCTTCAACGACTGCAACTGATCTCTCAAGTATCCGTCTTTTATTGCATGTCGTCAACTCCATGCTCATGCAATGTAAATGA 3978 0.4671 MMASPNNHHPNPNAHPPPPFDMHSFFNPPPPSSNPNPNPSQSSQYPPPFPAAAPFPFPAFDLPLHHHRSLSFPTQPIPPPSNPNAGARLMALLSNPSPPLPDFAVPSSSPSTVLAAATAAAAALTRLPSGKVPKGRHLSGERVSYDVDVRLPGEIQPQLEVAPITKYGSDPNPVLGRQIAVNKSYICYGLKQGNIRVLNIHTAVRSLLRGHTQRVTDLAFFAEDVHLLASVGTDGRVYVWKISEGPDDEDKLQITANIVIAIQIVGEEKVEHPQICWHCHKQEILIVGMGKHVFRIDTTKVGNGEAVVAEDPPLRCPVDKLIDGVQLVGTHDGEVTDLSMCQWMTNRLVSASQDGTIKIWEDRKTQPLEVLRPHDGHPVFSATFFTAPHQPDHIVLITAGPQNREVKLWVSASEEGFLLPSDTESWKCTQTLELKSSAQPSRDAFFNQVAALPHAGLLLLANAQRNAIYAVHLEYGPNPESTRMDYIAEFTVTMPILSFTGTSDILPHGEHIVQVYCVQTQAIQQYALDLAQCLPPPLDNVGLEKSDSVVSADAITVEGFHTLDSSAPKIMLQAGSTENGLGPRYPLSSGHVEAPISSSNTEAKPVTLAPSSGEPDIVCIPSPPLPLSPRLSRKLSDIRNLQSNLGDHVGEHPVNDYSVDRQMDTIHRNLSETFNSESKNDEKKVKQDHISSVLNPSVMFKQPTHLITPSEITKAGSSENNIIDGKSEGEGKMQDVGNAEVEVKVVGETISNQIDEFGRQGSQQNPVSDSKEKIFCSQASDLGIEMAREGCVITAGDTYLTEEPGQLDSTGAVSLSQPPDTGEDGLQDMAKDAHEKVSDSSTSVAVPPSPVPNAKGKRQKGKNSQASGLSSSSPSVCNSTDSSNEPNGNSSLPSAENAFPQILAMQESINQLLTMQKEMQKQMTMMVAVPVTKEGRRLEAALGRNMEKAVKANSDALWARIQEENAKNEKLLRDRIQQITGLISNFMNKDLPAILEKTVKKEMASVGQAVVRAMSPAVEKIISSAIVESFQRGVGDKAVNQLDKSVSSKLEATVARQIQAQFQTTGKQVLQEALKSSFETSAVPAFEMSCKAMFEQVDATFQKGMAEHSAAVQQRLESAPTSLAMTLRDSINSASSISQTLSREVLEGQRKLVALAATRTNSGTLNPMPVQLNNGPLLREKVEVPLDPTQELARLISERKFEEAFIGALHRSDVSIVSWLCSQVDLHGLLAMAPLPLSQGVLLSLLQQLACDINNDTSRKIAWLTDVASAINPSDPVIAMHTRPIFEQVFQILNHQRSLPSTTATDLSSIRLLLHVVNSMLMQCK 1325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g01019 1325 MobiDBLite consensus disorder prediction 802 895 - -
Viun6g01019 1325 FunFam Enhancer of mRNA-decapping protein 4 1237 1323 - -
Viun6g01019 1325 Pfam WD40 region of Ge1, enhancer of mRNA-decapping protein 161 473 IPR032401 -
Viun6g01019 1325 Gene3D - 164 514 IPR015943 GO:0005515
Viun6g01019 1325 ProSiteProfiles Trp-Asp (WD) repeats profile. 208 250 IPR001680 GO:0005515
Viun6g01019 1325 ProSiteProfiles Trp-Asp (WD) repeats profile. 328 370 IPR001680 GO:0005515
Viun6g01019 1325 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 328 361 - -
Viun6g01019 1325 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 208 245 - -
Viun6g01019 1325 MobiDBLite consensus disorder prediction 592 607 - -
Viun6g01019 1325 MobiDBLite consensus disorder prediction 10 50 - -
Viun6g01019 1325 SMART WD40_4 324 361 IPR001680 GO:0005515
Viun6g01019 1325 SMART WD40_4 201 241 IPR001680 GO:0005515
Viun6g01019 1325 MobiDBLite consensus disorder prediction 858 895 - -
Viun6g01019 1325 Gene3D - 1237 1325 IPR044938 -
Viun6g01019 1325 SUPERFAMILY WD40 repeat-like 163 463 IPR036322 GO:0005515
Viun6g01019 1325 PANTHER ENHANCER OF MRNA-DECAPPING PROTEIN 4 2 1323 IPR045152 GO:0031087
Viun6g01019 1325 MobiDBLite consensus disorder prediction 1 50 - -
Viun6g01019 1325 FunFam enhancer of mRNA-decapping protein 4 160 474 - -
Viun6g01019 1325 MobiDBLite consensus disorder prediction 803 821 - -
Viun6g01019 1325 MobiDBLite consensus disorder prediction 581 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g01019 Viun-Chr6 19723805 19732731 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g01019 K12616 - gmx:100798228 2091.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g01019 6 19723805 19732731 Viun6g01019 6 19723805 19732731 ECH