Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00973 ATGTCGGAAAAGGGTCGGCCACTACCAAAATTTGGCGAATGGGATGTCAATGATCCAGCCTCAGCTGAGGGGTTCACAGTGATATTTAATAAGGCAAGGGATGAAAAAAAGACAGGTGGCAATCCTGAGTCACCAGCAAAGACTGCCGCTGATCCTCACAGCAAACCTGCAGTAGATCCTGGGAAAACTCAGACTAAAAAATGGTTTTGCTGCATGCAACCTTCTGCCGAATGA 234 0.4701 MSEKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGNPESPAKTAADPHSKPAVDPGKTQTKKWFCCMQPSAE 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00973 77 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 3 70 IPR040387 -
Viun6g00973 77 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 38 IPR008700 -
Viun6g00973 77 MobiDBLite consensus disorder prediction 30 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00973 Viun-Chr6 19287759 19290850 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00973 - - gmx:100305826 159.458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00973 6 19287759 19290850 Viun6g00973 6 19287759 19290850 ECH