Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00950 ATGGGCGAGGAAGAACCGGTGAATGAATTTTCGGAGACTGATTCAAATGGAAAGAACTCTAAGGAGAAAATTTTGGATAGAAGTACTGAGAAAAAGGACTTGGAAGCTGACGAAGGAAAAGTATTGGCGAACAATGGAATCAAAGAGTTGAAAGAAAATATCGTAAAAGAAATTGAAGATGTGAAAGCTGATAATGTGGAAAAGGTAGAAGAGGACAAGAAAGTTGGTGTTGTGGAAGAAGCTATAGAGGATAAGAAAGAAACGAAAGATGATAAGACAGAAGGTGGAATGGATGGAGCAAAAGAGGATAAGAGAGAAGATGGAGTGGAAGAGGCAAGAGAGGATAATAAAGAAGATGGAGTGGAAGAAGCAAAAGAGGATAAGAAAGAAGGTAGAGTGGAAGACGCAAAAGAGGATAAGAAAGAGGATGGAGTGGAAGACGTGAAAGAGTATAAGAAAGAAGATGGAGTGGATGGAGTATACAAGGATGGAAAAGACGGGGCAGGAGAAGTAAAAGAGGATAAGGAAGTTGATGATGTAGGAGTGAAGGATGGTGTGGAAGTTGATGGTGTAAAACAAGTCAAGGAGGATAAGGCAGTTAATGGTGTGGAAGAAGTTAAGGAGGATAAGGAAGTTGATGGTGTAAAAGATATAGTAGAAGATACAAAAGGTGATAAATCGAAAGAAATAGAGGAGGATAAGAAAGATTTTCATATATCTGAGAATGATAAAATGGATGAAGACACTGGGGTTAAAGAAACAGTGGAAGATAAACAAAAAAATGAAGAAGTGGAAACTGAGAAACCAGAAGTAGATGCTATGGAAGTAGAGGGTGGCATTAAGGGGAAGGAGGAGGGTGATGAAAAGGAGAAAATTGAAGTGGCAATGAAAGAGGACCCGGATGAAGACAAAGATAAAGATAATATTGATAAGTTAAAAGAAGTGAAGGAAGAGAATAATAAGGTTAACAAAGGATCAAGAAAACGAGGGAGAGGGAAGATCAATGTGGAGAAAGATAAAGAAAAAAGAAAGGAATTGAAGAAAATAGAACCAAGGACTCCTACTATTGACCGCCCTGTGCGAGAAAGGAAGGTAGTTGAGAGGTTGGTAACATCAATTGAGAAAGATCCAACCAAAGAATTTCGCATCGAAAAGGGACGTGGCACACCTTTAAAAGACATACCAAATGTTGCCTTTAAGCTATCCAGAAGGAAGACTGATGATACCTTCAAACTTCTCCATACAATTCTCTTTGGAAGGAGAGGGAAGGCAATTCAGATCAAGAGTAATATATCAAGGTTTTCTGGTTTTGTTTGGCATGACAATGAGGAAAAGCAAATGATTAAAATAAAAGAAAAACTTGACAAGTGTAATAAGGAGAGGTTACTGGAATTCTGTGATGTTCTTGACATAACAGTTAACAGGGCAACAATGAGGAAGGAAGATATCATTGCTAAGCTGATAGACTTTTTAGTTGCCCCTCATGCAACTACAACTGTGTTGCTTGCCGAAAAGGAGAAGCCCAGTAAAGGAAAAAAGCGCAAGCGTATTGTAAAACGGCGTTCATCAGGATCTGGGACAATTTCAAGACGTTCTGCCAAGAGTATGAGGAAAAATGAAGATTCTTTAGCTGTGCCGAGAAAGAGTCCTACTGACACAGAAGATGAGTCAGATGAAGAAAATGACGAAGAAAATGAAAATGGTGTTGCTGGCAAATCTGAAGATGAAACATCAGAGAAATTTGAAAGTGAAGACAAAAGTGATTCTGGGAGTGAATCTGAAGATATGAAAGAAAAGAAAAAACCTTCTAAAACATCATCCGCCAAGAAAGAATCTGCTAAGAAAAGTAAAATTGAGAAAATTCCAGTTGCCAACAAATCTCACTCACCCCAAAAAAGAACTCCAAAGAAATCATCATCCAACCTCTCAAAGTCTGATGAGGATAGTGATGAAAGTCCTAAGATTTCAAGGAAGAACAAAAATGAGAAAGGAGGAAAGCAGAAGACATCAACACCCACTAAGCCTTCCTCCCTAGAGAGAAGTGCAGAAAAGGTTACTAGAGGAAGAGGCAAGAAGAAGGAGAAATCGAGCCCCACTGATAATCAGTTACATGATGCAATATGTGAAATTCTTAAAGAAGTTGACTTCAATACGGCTACATTTACTGACATTCTGAAGAAACTTGCCAAACAATTTGATGTGGATCTGGCCCCGAGAAAGGCAGCTATAAAGCTCATGATTCAGGAAGAGCTGACAAAACTAGCTGATGAAGCGGATGATGAAAACGGAGAAGAGGATGCAGAAAAAGATGAAGCCCTGTCTACAGGCCAGAAGGTTGAAGCTTGA 2346 0.3896 MGEEEPVNEFSETDSNGKNSKEKILDRSTEKKDLEADEGKVLANNGIKELKENIVKEIEDVKADNVEKVEEDKKVGVVEEAIEDKKETKDDKTEGGMDGAKEDKREDGVEEAREDNKEDGVEEAKEDKKEGRVEDAKEDKKEDGVEDVKEYKKEDGVDGVYKDGKDGAGEVKEDKEVDDVGVKDGVEVDGVKQVKEDKAVNGVEEVKEDKEVDGVKDIVEDTKGDKSKEIEEDKKDFHISENDKMDEDTGVKETVEDKQKNEEVETEKPEVDAMEVEGGIKGKEEGDEKEKIEVAMKEDPDEDKDKDNIDKLKEVKEENNKVNKGSRKRGRGKINVEKDKEKRKELKKIEPRTPTIDRPVRERKVVERLVTSIEKDPTKEFRIEKGRGTPLKDIPNVAFKLSRRKTDDTFKLLHTILFGRRGKAIQIKSNISRFSGFVWHDNEEKQMIKIKEKLDKCNKERLLEFCDVLDITVNRATMRKEDIIAKLIDFLVAPHATTTVLLAEKEKPSKGKKRKRIVKRRSSGSGTISRRSAKSMRKNEDSLAVPRKSPTDTEDESDEENDEENENGVAGKSEDETSEKFESEDKSDSGSESEDMKEKKKPSKTSSAKKESAKKSKIEKIPVANKSHSPQKRTPKKSSSNLSKSDEDSDESPKISRKNKNEKGGKQKTSTPTKPSSLERSAEKVTRGRGKKKEKSSPTDNQLHDAICEILKEVDFNTATFTDILKKLAKQFDVDLAPRKAAIKLMIQEELTKLADEADDENGEEDAEKDEALSTGQKVEA 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00950 781 MobiDBLite consensus disorder prediction 680 703 - -
Viun6g00950 781 SUPERFAMILY DEK C-terminal domain 692 751 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 639 667 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 217 354 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 77 184 - -
Viun6g00950 781 FunFam DEK domain-containing chromatin associated protein 689 753 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 505 703 - -
Viun6g00950 781 PANTHER DEK PROTEIN 242 768 IPR044198 GO:0003677|GO:0006325
Viun6g00950 781 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 697 752 IPR014876 -
Viun6g00950 781 Gene3D - 690 753 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 755 781 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 1 43 - -
Viun6g00950 781 Coils Coil 440 460 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 15 43 - -
Viun6g00950 781 Pfam DEK C terminal domain 698 751 IPR014876 -
Viun6g00950 781 MobiDBLite consensus disorder prediction 566 622 - -
Viun6g00950 781 MobiDBLite consensus disorder prediction 533 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00950 Viun-Chr6 19138446 19145730 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00950 K17046 - gmx:100812631 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00950 6 19138446 19145730 Viun6g00950 6 19138446 19145730 ECH