Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00799 ATGGGAAACAGAACTGTGATCACAAATTCTCTTCTCTTTCTCTGTTTCTTCATCTTCTTCAGCTTAGAACACTTGGAGGCACAAAAGGCTCCTGCAGTTTATGTGTTTGGAGACTCACTTGTTGATGTTGGCAACAACAATTACTTGCCTTTATCCATTGAAAAGGCCATTCTTCCTCACTATGGCATTGATTTTCCTACTAAGAAACCCACCGGCAGATTCACCAATGGCAAAAATGCTGCAGATTTAATTGCTGAAAAATTGGGTCTACCCACTTCACCACCTTATCTCTCCCTTCTCTCAAAAGTTCACAATTCCAACAAAAACATATCTTTTCTGAATGGTGTTAACTTTGCCTCTGGAGGTGCTGGAATATTTAATGCCTCAGATAAAGGTTTTATGCAATCAATTCCTTTGCAGAAACAAGTGGACTACTACTCACAAGTGCATGAAACACTTAGACAGCAAATAGAAGCATCTTCTCTTGAGAAACACCTTTCAAAGTCTATTTTCATTGTGGTGATTGGTGGCAACGATGTCTTTGGTTATTTTGACTCAAAGGATCTTCAAAATAAAAACACTCCTCAACAGTATGCAGATTCCATGGCTTCCACATTGAAACTTCAACTACAGAGATTATACAACAATGGTGCAAAGAAATTTGAGATTGCTGGTGTTGGTCCAATTGGGTGCTGCCCTGCATACAGGCTTAAGAACAAAACAGAATGTGCTTCTGCAGCAAATGATTTGTCAGCCAAATACAATGAAGCTCTTCAATACATGTTAAAGGAATGGAAGTTGGAGAAAAAAGACATAAATTATTCCTATTTTGATACTTATGCTGCCCTCCAAGACCTCATTCACAATCCAACTTCTTATGGATTTGTTAATGTAAAAGGTGCTTGTTGTGGACTTGGTGAGTTGAATGCACAAATTCCATGTCTACCAGTGTCAAGCATTTGTTCCAACAGACAAGACCATGTTTTCTGGGATGCATTCCATCCGACAGAGGCAGCTTCTCGCATATTTGTGGATGAAATATTCAAAGGACCTTCAAAATTCATATCTCCTATTAATATGGAACAGCTATTGGCTATCTGA 1101 0.3869 MGNRTVITNSLLFLCFFIFFSLEHLEAQKAPAVYVFGDSLVDVGNNNYLPLSIEKAILPHYGIDFPTKKPTGRFTNGKNAADLIAEKLGLPTSPPYLSLLSKVHNSNKNISFLNGVNFASGGAGIFNASDKGFMQSIPLQKQVDYYSQVHETLRQQIEASSLEKHLSKSIFIVVIGGNDVFGYFDSKDLQNKNTPQQYADSMASTLKLQLQRLYNNGAKKFEIAGVGPIGCCPAYRLKNKTECASAANDLSAKYNEALQYMLKEWKLEKKDINYSYFDTYAALQDLIHNPTSYGFVNVKGACCGLGELNAQIPCLPVSSICSNRQDHVFWDAFHPTEAASRIFVDEIFKGPSKFISPINMEQLLAI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00799 366 CDD SGNH_plant_lipase_like 31 351 IPR035669 -
Viun6g00799 366 Pfam GDSL-like Lipase/Acylhydrolase 33 346 IPR001087 GO:0016788
Viun6g00799 366 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 31 363 - -
Viun6g00799 366 SUPERFAMILY SGNH hydrolase 30 348 - -
Viun6g00799 366 Gene3D SGNH hydrolase 21 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00799 Viun-Chr6 17785726 17789212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun6g00799 30 364 Acyl Lipid Metabolism Gene Families AT4G10950 34.018 1.25e-66 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00799 - - gmx:100790145 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00799 6 17785726 17789212 Viun6g00799 6 17785726 17789212 ECH
Viun6g00799 6 17785726 17789212 Viun8g02823 8 36483667 36486746 PCT