Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun6g00789 ATGGTGAAGGGCTTACACGGCCAGAACCTCCCCGCCGACGTGGCGCAGGTGGTTGATCAACTGGAGCGCCACTGCTTCGCTCCCGATGGATCTCTCATCTCCAAGCCTCTCTTCAACGATCTCCAACTCGTATCTTTCTCGCCCCATTCTGATCTCTGTGCCAGAGAGGAAATGTGCAGGGAGAGACTTCGTTACCTGGAAGCCATGGCGGTATATTCTGAGGCTATTGCAATGGTGGAAGAGTATCAGCAAGCCATTTCTGTATCTAACCTTGGGGGAATTAGAGATACCGGCAACCTTTATCCACAACTCGGGTTGAGGAACACTCCTCAGGTTTATCAGACTCTAGAGCATCAAATGGTTGTTGCTGAAGCAGCTCAACGATTGAGACTACCTCTTATCTCCAAAGATGGGGAAGTTCATGATGAGGACATTGAAAAGCTAAGTGTAGTGTCTCGAAGCTCCCTTGACAGTACTGTTAGCGGGGCCAACTCTTCTAATTATAACACTCCAAACAGCTCTGTTAGTGGGGCTAATTCTGCTCTTGTTGCTTCGGATCCAGTGGAGCTCGGTGTTGGTGGTGTTCCAAATCGTTTTTTGGGAATTACACCTGCTTATTTGTGGCAAACTCAGCGCCAAAAAACACCATTATCTGTGGATATGACTGAATATCGCTTGTCTGTTTCTCGGGAGGTAGATGCTCGGTTGAAAATGAAATGTGAAAAATTATCAGACGCCTTTGTATTGGATGATAATGATTCTTCATCGTCTGCAAGTCAAAGTTCAAGTTCTCGGCTTCCAGAAAGGGTGAAATTGTTGATTGAGGAGATTGAAAGAGAAGAAACAGCACTGCGTGATGACCTATATTCTGCAGATAGAAAGTTTGCCGAATATTACAATGTCTTGGAGCAGATACTTGCAGTGCTTATTAAACTTGTCAAAGATTTGAAGTTGGAGCATCAACACAAATACGATGACCTGCAAAAGACTTGGCTCTGTAAAAGATGTGAAACCATGAGTGCTAAATTGAGGGTTCTGGAACACGTTCTCCTGCTTGAAACTTACACTAAGGAATCCATACCTGCCCTTCATAAGATAAGGAAATATCTTGTTGAGGCAACAGAAGAAGCTTCTATTGCATATAACAAAGCGGTTACCCGGCTGCGTGAGTACCAGGGTGTCGATCCTCACTTTGACAACATTGCAAGGCAGTACCATGACATTGTGCAGAAATTGGAGAACATGCAATGGACAATCCACCAAGTTGAAATGGATCTGAAACGTTTGCCAGATAAACCTAGCACATAG 1308 0.4472 MVKGLHGQNLPADVAQVVDQLERHCFAPDGSLISKPLFNDLQLVSFSPHSDLCAREEMCRERLRYLEAMAVYSEAIAMVEEYQQAISVSNLGGIRDTGNLYPQLGLRNTPQVYQTLEHQMVVAEAAQRLRLPLISKDGEVHDEDIEKLSVVSRSSLDSTVSGANSSNYNTPNSSVSGANSALVASDPVELGVGGVPNRFLGITPAYLWQTQRQKTPLSVDMTEYRLSVSREVDARLKMKCEKLSDAFVLDDNDSSSSASQSSSSRLPERVKLLIEEIEREETALRDDLYSADRKFAEYYNVLEQILAVLIKLVKDLKLEHQHKYDDLQKTWLCKRCETMSAKLRVLEHVLLLETYTKESIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDNIARQYHDIVQKLENMQWTIHQVEMDLKRLPDKPST 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun6g00789 435 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 7 427 IPR029327 GO:0051225|GO:0070652
Viun6g00789 435 MobiDBLite consensus disorder prediction 157 178 - -
Viun6g00789 435 Pfam HAUS augmin-like complex subunit 4 191 424 IPR029327 GO:0051225|GO:0070652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun6g00789 Viun-Chr6 17628908 17634909 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun6g00789 K16587 - gmx:100790889 778.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun6g00789 6 17628908 17634909 Viun6g00789 6 17628908 17634909 ECH